About Archivesica marissinica

The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Archivesica marissinicaMolluscaDeep-Sea ClamHydrothermal vent1,361Haima cold seep in the South China Sea2291877

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM1484369v11.5GbChromosome2020JABXNX01Hong Kong Baptist UniversityPRJNA62989893.50%28,949

References
TitleJournalPubmed ID
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic ClamMolecular Biology and Evolution32956455

Gene Information

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Gene IDDescription
Ama00583RNA DEMETHYLASE ALKBH5
Ama00584TNF RECEPTOR ASSOCIATED FACTOR
Ama00585MAP/MICROTUBULE AFFINITY-REGULATING KINASE
Ama00586DIACYLGLYCEROL LIPASE HOMOLOG-RELATED
Ama00589BANK1/PIK3AP1 FAMILY MEMBER
Ama00591CXC DOMAIN-CONTAINING PROTEIN-RELATED
Ama00592N-ACETYLTRANSFERASE 9
Ama00594DIACYLGLYCEROL LIPASE HOMOLOG-RELATED
Ama00595THYMUS, BRAIN AND TESTES-ASSOCIATED
Ama00596
Ama00597
Ama00603
Ama00605
Ama00606DUF4605 DOMAIN-CONTAINING PROTEIN
Ama00607BIOGENESIS OF LYSOSOME-RELATED ORGANELLES COMPLEX 1 SUBUNIT 6
Ama00608TRANSPOSON
Ama00610TRNA (GUANINE-9-) METHYLTRANSFERASE
Ama00611MICROSOMAL TRIGLYCERIDE TRANSFER PROTEIN, LARGE SUBUNIT
Ama00613
Ama00614PROTEASE M14 CARBOXYPEPTIDASE
Ama00617MITOTIC SPINDLE ASSEMBLY CHECKPOINT PROTEIN MAD1 MITOTIC ARREST DEFICIENT-LIKE PROTEIN 1
Ama00618RETINOIC ACID INDUCED 1/TRANSCRIPTION FACTOR 20
Ama00619MAP/MICROTUBULE AFFINITY-REGULATING KINASE
Ama00620MYOSIN
Ama00622MYOSIN HEAVY CHAIN, NON-MUSCLE
Ama00623CINGULIN-LIKE PROTEIN 1-RELATED
Ama00624
Ama00625SYNTAXIN
Ama00626VOLTAGE-GATED POTASSIUM CHANNEL
Ama00627
Ama00629DISKS LARGE HOMOLOG 5
Ama00630PEPTIDYL-PROLYL CIS-TRANS ISOMERASE
Ama00631INWARD RECTIFIER POTASSIUM CHANNEL
Ama00633INWARD RECTIFIER POTASSIUM CHANNEL
Ama0063452 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED
Ama00635
Ama00636
Ama00637EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN
Ama00641
Ama00642RIBOSOMAL PROTEIN S6 KINASE
Ama00643TRANSPOSON
Ama00644RIBOSOMAL PROTEIN S6 KINASE
Ama00645RIBOSOMAL PROTEIN S6 KINASE
Ama00646ADP-RIBOSYLATION FACTOR-LIKE PROTEIN 2-RELATED
Ama00648SERINE/ARGININE RICH SPLICING FACTOR
Ama00649MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM22
Ama00650(E3-INDEPENDENT) E2 UBIQUITIN-CONJUGATING ENZYME
Ama00651FANCONI ANEMIA CORE COMPLEX-ASSOCIATED PROTEIN 24
Ama00652UNCHARACTERIZED
Ama00653MARGINAL ZONE B- AND B1-CELL-SPECIFIC PROTEIN
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