About Archivesica marissinica

The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Archivesica marissinicaMolluscaDeep-Sea ClamHydrothermal vent1,361Haima cold seep in the South China Sea2291877

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM1484369v11.5GbChromosome2020JABXNX01Hong Kong Baptist UniversityPRJNA62989893.50%28,949

References
TitleJournalPubmed ID
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic ClamMolecular Biology and Evolution32956455

Gene Information

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Gene IDDescription
Ama00173SI:CH211-196P9.1-RELATED
Ama00174UNCHARACTERIZED
Ama00175
Ama00176PRE-MRNA-SPLICING FACTOR ISY1
Ama00177U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN IMP4
Ama00178TANDEM PH DOMAIN CONTAINING PROTEIN
Ama00179ACROSIN-RELATED
Ama00180SODIUM-COUPLED MONOCARBOXYLATE TRANSPORTER
Ama00181TRANSPOSON
Ama00182
Ama00183SODIUM-COUPLED MONOCARBOXYLATE TRANSPORTER
Ama00184
Ama00185PROTEIN CBG10425
Ama00186
Ama00187
Ama00188ACROSIN-RELATED
Ama00189HISTONE ACETYLTRANSFERASE
Ama00190EXCISION REPAIR CROSS-COMPLEMENTING 1 ERCC1
Ama00191JOSEPHIN 1, 2
Ama00197CALCIUM-ACTIVATED POTASSIUM CHANNEL ALPHA CHAIN
Ama001985-HYDROXYTRYPTAMINE RECEPTOR
Ama00199PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Ama00200REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Ama00201
Ama002025-HYDROXYTRYPTAMINE RECEPTOR
Ama00203
Ama00205RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
Ama00206
Ama00207ACTIN-RELATED PROTEIN 2/3 COMPLEX SUBUNIT 1
Ama00208ACTIN-RELATED PROTEIN 2/3 COMPLEX SUBUNIT 1
Ama00209MUCIN-22
Ama00210
Ama00214RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
Ama00215RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
Ama00216
Ama00219
Ama00220CXC DOMAIN-CONTAINING PROTEIN-RELATED
Ama00221
Ama00222CHROMOBOX PROTEIN HOMOLOG 7
Ama00223ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 4
Ama00224UBIQUITIN CARBOXYL-TERMINAL HYDROLASE
Ama00226PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Ama00227MIP08469P
Ama00230GROWTH AND TRANSFORMATION-DEPENDENT PROTEIN
Ama00231BCL-2 RELATED
Ama00233TRANSCRIPTIONAL REPRESSOR CTCFL-RELATED
Ama00235REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Ama00236
Ama00237TRANSPOSABLE ELEMENT-RELATED
Ama00239
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