About Archivesica marissinica

The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Archivesica marissinicaMolluscaDeep-Sea ClamHydrothermal vent1,361Haima cold seep in the South China Sea2291877

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM1484369v11.5GbChromosome2020JABXNX01Hong Kong Baptist UniversityPRJNA62989893.50%28,949

References
TitleJournalPubmed ID
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic ClamMolecular Biology and Evolution32956455

Gene Information

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Gene IDDescription
Ama00379RNA-BINDING PROTEIN LUC7-RELATED
Ama00380DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC2
Ama00381TRANSPOSON
Ama00382TRANSPOSON
Ama00383PREFOLDIN SUBUNIT 1-RELATED
Ama00385JITTERBUG, ISOFORM N
Ama00388SOLUTE CARRIER FAMILY 22 MEMBER
Ama00391VOLTAGE-DEPENDENT CALCIUM CHANNEL GAMMA SUBUNIT
Ama00392
Ama00393INHIBITOR OF APOPTOSIS
Ama00394RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR
Ama00395NEUROTRANSMITTER GATED ION CHANNEL
Ama00397CXC DOMAIN-CONTAINING PROTEIN-RELATED
Ama00398CXC DOMAIN-CONTAINING PROTEIN-RELATED
Ama00399
Ama00407TELOMERE LENGTH REGULATION PROTEIN TEL2 FAMILY MEMBER
Ama00408DYNEIN LIGHT CHAIN
Ama00409ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 39-RELATED
Ama00410
Ama00411RETINOBLASTOMA-BINDING PROTEIN 6
Ama00412
Ama00413PROLIFERATING CELL NUCLEAR ANTIGEN
Ama00414ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 4
Ama00416EF HAND DOMAIN FAMILY A1,A2-RELATED
Ama00417HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN-RELATED
Ama00418
Ama00419
Ama00422AMINOTRANSFERASE
Ama00423MYOSIN REGULATORY LIGHT CHAIN 2
Ama00424UNCHARACTERIZED
Ama00425SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED
Ama00426
Ama00427RECEPTOR FOR ACTIVATED PROTEIN KINASE C RACK1
Ama00428UNCHARACTERIZED
Ama00429PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 2, MITOCHONDRIAL
Ama00430PRE-MRNA SPLICING FACTOR PRP31
Ama00431TUBERIN
Ama00432TUBERIN
Ama00434WD-40 REPEAT PROTEIN
Ama00435CHARGED MULTIVESICULAR BODY PROTEIN
Ama00436PHOSPHATIDYLINOSITOL-GLYCAN BIOSYNTHESIS CLASS X PROTEIN
Ama00437AG-1 BLOOD STAGE MEMBRANE PROTEIN HOMOLOGUE
Ama00438ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Ama00439
Ama00440
Ama00441
Ama00442
Ama00443ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Ama00444
Ama00445SERINE/THREONINE PROTEIN PHOSPHATASE
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