About Archivesica marissinica

The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Archivesica marissinicaMolluscaDeep-Sea ClamHydrothermal vent1,361Haima cold seep in the South China Sea2291877

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM1484369v11.5GbChromosome2020JABXNX01Hong Kong Baptist UniversityPRJNA62989893.50%28,949

References
TitleJournalPubmed ID
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic ClamMolecular Biology and Evolution32956455

Gene Information

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Gene IDDescription
Ama00244NETRIN RECEPTOR UNC5
Ama00247PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Ama00249MARINER MOS1 TRANSPOSASE-LIKE PROTEIN
Ama00251SHIPPO-1-RELATED
Ama00254
Ama00255ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Ama00256
Ama00258
Ama00259TRANSPOSABLE ELEMENT-RELATED
Ama00260SET DOMAIN-CONTAINING PROTEIN-RELATED
Ama00261ADENYLOSUCCINATE LYASE
Ama00263PALMITOYLTRANSFERASE ZDHHC16
Ama00265ZINC FINGER RAN-BINDING DOMAIN-CONTAINING PROTEIN 2 ZRANB2-RELATED
Ama0026652 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED
Ama00268CHITINASE
Ama00269CHITINASE
Ama00270CHITINASE
Ama00271CHITINASE
Ama00272
Ama00274
Ama00275
Ama00276
Ama00278PROTEIN DISPATCHED-RELATED
Ama00281RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR
Ama00282INHIBITOR OF APOPTOSIS
Ama00283PROTEIN DISPATCHED-RELATED
Ama00284
Ama00286L1 TRANSPOSABLE ELEMENT-RELATED
Ama00287
Ama00288TRNA WYBUTOSINE-SYNTHESIZING PROTEIN 3
Ama00289
Ama00290UBA-LIKE DOMAIN-CONTAINING PROTEIN 2
Ama00291MAHOGUNIN
Ama00293LD22376P
Ama0029460S RIBOSOMAL PROTEIN L38
Ama00295LD22376P
Ama00296
Ama00297RUN AND SH3 DOMAIN CONTAINING
Ama0029852 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED
Ama00299PROTEIN CBG12474
Ama00303
Ama00308TRANSMEMBRANE CHANNEL-RELATED
Ama00309
Ama00310
Ama00311HISTONE H3
Ama00312HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATED
Ama00314BIOGENESIS OF LYSOSOME-RELATED ORGANELLES COMPLEX 1 SUBUNIT 2
Ama00315E3 UBIQUITIN-PROTEIN LIGASE PRAJA
Ama00316POLY [ADP-RIBOSE] POLYMERASE
Ama00317PHD-TYPE DOMAIN-CONTAINING PROTEIN
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