The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama00001 | |
Ama00002 | |
Ama00003 | - |
Ama00005 | FMRFAMIDE RECEPTOR-RELATED |
Ama00007 | |
Ama00008 | FMRFAMIDE RECEPTOR-RELATED |
Ama00009 | CENTROCORTIN FAMILY MEMBER |
Ama00010 | |
Ama00011 | |
Ama00012 | |
Ama00013 | |
Ama00014 | |
Ama00015 | |
Ama00016 | |
Ama00017 | |
Ama00018 | |
Ama00019 | |
Ama00020 | |
Ama00021 | |
Ama00022 | |
Ama00023 | |
Ama00024 | |
Ama00025 | |
Ama00026 | NOVEL ZZ TYPE ZINC FINGER DOMAIN CONTAINING PROTEIN |
Ama00027 | GAMMA-GLUTAMYLTRANSPEPTIDASE (AFU_ORTHOLOGUE AFUA_4G13580) |
Ama00028 | ALANINE RACEMASE |
Ama00030 | ALANINE RACEMASE |
Ama00034 | |
Ama00042 | LEUKOCYTE RECEPTOR CLUSTER MEMBER 9 |
Ama00044 | POLYCYSTIN FAMILY MEMBER |
Ama00045 | |
Ama00046 | POLYCYSTIN FAMILY MEMBER |
Ama00048 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Ama00049 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama00050 | SGNH_HYDRO DOMAIN-CONTAINING PROTEIN |
Ama00051 | |
Ama00052 | |
Ama00053 | |
Ama00054 | C10ORF188 FAMILY MEMBER |
Ama00056 | RHOMBOID-RELATED PROTEIN |
Ama00057 | COLLAGEN ALPHA |
Ama00058 | COLLAGEN ALPHA |
Ama00059 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama00060 | SERINE PROTEASE-RELATED |
Ama00062 | F5/8 TYPE C DOMAIN-CONTAINING PROTEIN-RELATED |
Ama00064 | THAP DOMAIN PROTEIN |
Ama00065 | TRANSFORMING GROWTH FACTOR-BETA RECEPTOR TYPE I AND II |
Ama00066 | TRANSFORMING GROWTH FACTOR-BETA RECEPTOR TYPE I AND II |
Ama00071 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Ama00074 | CYTOCHROME P450 FAMILY 3 |