About Archivesica marissinica

The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Archivesica marissinicaMolluscaDeep-Sea ClamHydrothermal vent1,361Haima cold seep in the South China Sea2291877

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM1484369v11.5GbChromosome2020JABXNX01Hong Kong Baptist UniversityPRJNA62989893.50%28,949

References
TitleJournalPubmed ID
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic ClamMolecular Biology and Evolution32956455

Gene Information

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Gene IDDescription
Ama00654WINGED HELIX DOMAIN-CONTAINING PROTEIN
Ama00655CASPASE
Ama00656
Ama00657RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
Ama00658
Ama00659ECSIT EVOLUTIONARILY CONSERVED SIGNALING INTERMEDIATE IN TOLL PATHWAYS
Ama00661
Ama00662SNF2/RAD54 FAMILY MEMBER
Ama00663FAT ATYPICAL CADHERIN-RELATED
Ama00665CADHERIN-87A
Ama00667CADHERIN-87A
Ama00668REVERSE TRANSCRIPTASES
Ama00669PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Ama00671RIBONUCLEASE P SUBUNIT P21
Ama00672
Ama00673ATAXIA TELANGIECTASIA MUTATED ATM -RELATED
Ama00678SORBITOL DEHYDROGENASE
Ama00679
Ama00680EXOSOME COMPLEX COMPONENT
Ama00681ATP-DEPENDENT RNA HELICASE DBP3
Ama00682EUKARYOTIC TRANSLATION INITIATION FACTOR 3
Ama00683
Ama00684
Ama00686PALMITOYLTRANSFERASE ZDHHC16
Ama00688
Ama00689
Ama00690BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE
Ama00691
Ama00692
Ama00693ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Ama00694
Ama00695MIP08469P
Ama006967,8-DIHYDRO-8-OXOGUANINE TRIPHOSPHATASE
Ama00697CALCIUM-INDEPENDENT PHOSPHOLIPASE A2
Ama00698
Ama00699
Ama00700ZINC FINGER CCHC DOMAIN-CONTAINING PROTEIN 7
Ama00701SPERIOLIN-BINDING FACTOR
Ama00702DNA POLYMERASE DELTA SUBUNIT 2
Ama00703HEH2P
Ama00704ANTIGEN 332, DBL-LIKE PROTEIN-RELATED
Ama00705
Ama00706THYMIDINE KINASE
Ama00707ADIPOR/PROGESTIN RECEPTOR-RELATED
Ama00708
Ama00709POLYCYSTIN FAMILY MEMBER
Ama007103BP-1 RELATED RHOGAP
Ama00711RIBOSOME BIOGENESIS REGULATORY PROTEIN
Ama00712HEH2P
Ama00713GEO12009P1
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