About Archivesica marissinica

The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Archivesica marissinicaMolluscaDeep-Sea ClamHydrothermal vent1,361Haima cold seep in the South China Sea2291877

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM1484369v11.5GbChromosome2020JABXNX01Hong Kong Baptist UniversityPRJNA62989893.50%28,949

References
TitleJournalPubmed ID
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic ClamMolecular Biology and Evolution32956455

Gene Information

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Gene IDDescription
Ama00849OLIGORIBONUCLEASE, MITOCHONDRIAL
Ama00850ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Ama00851RIBOSOME BIOGENESIS PROTEIN TSR3 HOMOLOG
Ama00852
Ama00853
Ama00854NXPE FAMILY MEMBER
Ama00856N-LINKED OLIGOSACCHARIDE PROCESSING
Ama00857TRANSPOSABLE ELEMENT-RELATED
Ama00859TEMPTIN
Ama00861
Ama00862LEUCINE-RICH REPEAT AND IQ DOMAIN-CONTAINING PROTEIN 1-RELATED
Ama00864
Ama00865SEC31-RELATED PROTEIN
Ama00866
Ama00867SOLUTE CARRIER FAMILY 22 MEMBER
Ama00868
Ama00869
Ama00870TRANSMEMBRANE 9 SUPERFAMILY PROTEIN
Ama00871PUTATIVE-RELATED
Ama00872OVOCHYMASE-RELATED
Ama00874DISCOIDIN, CUB, EGF, LAMININ , AND ZINC METALLOPROTEASE DOMAIN CONTAINING
Ama00875WD40 REPEAT DOMAIN 95
Ama00876GOLGI-LOCALIZED, GAMMA-ADAPTIN EAR CONTAINING, ARF BINDING PROTEIN
Ama00877AP-5 COMPLEX SUBUNIT ZETA-1
Ama00878DYNEIN INTERMEDIATE CHAIN
Ama00879FLAVIN REDUCTASE
Ama00880RIBOSOMAL RNA METHYLTRANSFERASE
Ama00881CALPONIN HOMOLOGY DOMAIN-CONTAINING PROTEIN DDB_G0272472-RELATED
Ama00882UPF0193 PROTEIN EVG1
Ama00883
Ama00884DUAL OXIDASE 2
Ama00885SOLUTE CARRIER FAMILY 22 MEMBER
Ama00886SOLUTE CARRIER FAMILY 22 MEMBER
Ama00887
Ama00888
Ama00889PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Ama0089052 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED
Ama00892H/ACA RIBONUCLEOPROTEIN COMPLEX NON-CORE SUBUNIT NAF1
Ama00893TIM23
Ama00894CASPASE
Ama00895
Ama00896
Ama00897THAP DOMAIN PROTEIN
Ama00899FIBRONECTIN TYPE-III DOMAIN-CONTAINING PROTEIN-RELATED
Ama00901
Ama00902BIFUNCTIONAL 3'-PHOSPHOADENOSINE 5'-PHOSPHOSULFATE SYNTHASE
Ama00910
Ama00911TRANSPOSABLE ELEMENT-RELATED
Ama00912HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED
Ama00913
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