About Archivesica marissinica

The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Archivesica marissinicaMolluscaDeep-Sea ClamHydrothermal vent1,361Haima cold seep in the South China Sea2291877

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM1484369v11.5GbChromosome2020JABXNX01Hong Kong Baptist UniversityPRJNA62989893.50%28,949

References
TitleJournalPubmed ID
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic ClamMolecular Biology and Evolution32956455

Gene Information

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Gene IDDescription
Ama00914ATP-BINDING CASSETTE SUB-FAMILY C
Ama00915
Ama00916
Ama00919CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE
Ama00922TETRASPANIN
Ama00923ALANINE--GLYOXYLATE AMINOTRANSFERASE 2, MITOCHONDRIAL
Ama00925
Ama00926MITOFERRIN-1-RELATED
Ama00927POLYCYSTIN-1
Ama00930
Ama00933
Ama00934ZINC FINGER MIZ DOMAIN-CONTAINING PROTEIN
Ama00936
Ama00937POLYCYSTIN FAMILY MEMBER
Ama00938
Ama00939
Ama00940BETA TRANSDUCIN-RELATED PROTEIN
Ama00941BETA TRANSDUCIN-RELATED PROTEIN
Ama00942
Ama00943SNARE PROTEINS
Ama00944DNA REPLICATION-RELATED ELEMENT FACTOR, ISOFORM A
Ama00946TGF-BETA FAMILY
Ama00947
Ama00948
Ama00950DYNACTIN P62 SUBUNIT
Ama00951LIMKAIN B LKAP
Ama00953METEORIN-LIKE PROTEIN
Ama00956RE74312P
Ama00957PHOSPHATASE WITH HOMOLOGY TO TENSIN
Ama00958VITAMIN K-DEPENDENT GAMMA-CARBOXYLASE
Ama00961TRANSCRIPTION FACTOR MAF
Ama00962FORMIN HOMOLOGY 2 FAMILY MEMBER
Ama00966GALACTOSE-3-O-SULFOTRANSFERASE
Ama00967NEUROTRANSMITTER GATED ION CHANNEL
Ama0096852 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED
Ama00969SIGNAL PEPTIDE, CUB AND EGF-LIKE DOMAIN-CONTAINING
Ama00970
Ama00971
Ama00972TATA-BOX BINDING PROTEIN
Ama00973RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR
Ama00974COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING
Ama00976
Ama00980MITOCHONDRIAL RIBOSOMAL PROTEIN L41
Ama00982RIBONUCLEASE
Ama00985PDZ AND LIM DOMAIN PROTEIN ZASP
Ama00986-
Ama00990-
Ama01007
Ama01008DISCOIDIN, CUB, EGF, LAMININ , AND ZINC METALLOPROTEASE DOMAIN CONTAINING
Ama01010
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