The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama00714 | TESTIS-EXPRESSED PROTEIN 33 |
Ama00717 | DNA2/NAM7 HELICASE FAMILY |
Ama00718 | |
Ama00719 | INHIBITOR OF APOPTOSIS |
Ama00720 | RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR |
Ama00721 | |
Ama00723 | G-PROTEIN COUPLED RECEPTOR TKR-1-RELATED |
Ama00724 | G-PROTEIN COUPLED RECEPTOR |
Ama00725 | - |
Ama00728 | |
Ama00729 | |
Ama00730 | CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED |
Ama00731 | MAP/MICROTUBULE AFFINITY-REGULATING KINASE |
Ama00732 | |
Ama00734 | PROPERDIN |
Ama00736 | CLUSTERIN ASSOCIATED PROTEIN 1 |
Ama00737 | AUTOCRINE PROLIFERATION REPRESSOR PROTEIN A |
Ama00738 | AUTOCRINE PROLIFERATION REPRESSOR PROTEIN A |
Ama00739 | GEO09659P1 |
Ama00740 | |
Ama00741 | FIBRONECTIN TYPE-III DOMAIN-CONTAINING PROTEIN-RELATED |
Ama00744 | |
Ama00745 | MAP/MICROTUBULE AFFINITY-REGULATING KINASE |
Ama00746 | |
Ama00747 | |
Ama00749 | TRANSIENT RECEPTOR POTENTIAL CHANNEL |
Ama00750 | TRANSIENT RECEPTOR POTENTIAL CHANNEL |
Ama00751 | TRANSIENT RECEPTOR POTENTIAL CHANNEL |
Ama00752 | |
Ama00754 | |
Ama00755 | |
Ama00756 | KELCH PROTEIN |
Ama00757 | - |
Ama00758 | PROTEASE FAMILY C26 GAMMA-GLUTAMYL HYDROLASE |
Ama00759 | ARGININE DEMETHYLASE AND LYSYL-HYDROXYLASE JMJD |
Ama00760 | POLYCYSTIN FAMILY MEMBER |
Ama00761 | |
Ama00762 | DNA REPLICATION-RELATED ELEMENT FACTOR, ISOFORM A |
Ama00763 | IRON-SULFUR CLUSTER SCAFFOLD PROTEIN NFU-RELATED |
Ama00764 | |
Ama00765 | |
Ama00767 | SODIUM/CHLORIDE DEPENDENT TRANSPORTER |
Ama00768 | NADPH OXIDASE |
Ama00769 | SODIUM/CHLORIDE DEPENDENT TRANSPORTER |
Ama00770 | CELL FATE DETERMINING PROTEIN MAB21-RELATED |
Ama00771 | NEUROTRANSMITTER GATED ION CHANNEL |
Ama00772 | |
Ama00773 | SIMILAR TO RIKEN CDNA E130308A19 |
Ama00774 | PROTEIN CBG26694 |
Ama00775 |