About Archivesica marissinica

The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Archivesica marissinicaMolluscaDeep-Sea ClamHydrothermal vent1,361Haima cold seep in the South China Sea2291877

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM1484369v11.5GbChromosome2020JABXNX01Hong Kong Baptist UniversityPRJNA62989893.50%28,949

References
TitleJournalPubmed ID
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic ClamMolecular Biology and Evolution32956455

Gene Information

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Gene IDDescription
Ama00451ZINC FINGER PROTEIN
Ama00452
Ama00453NEUROTRANSMITTER GATED ION CHANNEL
Ama00455NEUROTRANSMITTER GATED ION CHANNEL
Ama00456CYTOCHROME P450 508A4-RELATED
Ama00457SHORT-CHAIN DEHYDROGENASE/REDUCTASE FAMILY 9C
Ama00458NADH-UBIQUINONE OXIDOREDUCTASE 13 KD-A SUBUNIT
Ama00459CYTOCHROME P450 508A4-RELATED
Ama00460ARGININE OR CREATINE KINASE
Ama00461ARGININE OR CREATINE KINASE
Ama00462
Ama00463PHYTANOYL-COA DIOXYGENASE DOMAIN CONTAINING 1
Ama00464
Ama00465HIGH MOBILITY GROUP PROTEIN DSP1
Ama00466EME1 PROTEIN
Ama00467TRANSMEMBRANE ANCHOR PROTEIN 1
Ama00468
Ama00469
Ama00470CARBOHYDRATE SULFOTRANSFERASE
Ama00471
Ama00473
Ama00474XLR/SCP3/FAM9
Ama00475
Ama00476UPF0472 PROTEIN C16ORF72
Ama00477
Ama00478SERINE/THREONINE-PROTEIN KINASE PLK
Ama00479
Ama00480THREE PRIME REPAIR EXONUCLEASE 1, 2
Ama00481
Ama00482CXC DOMAIN-CONTAINING PROTEIN-RELATED
Ama00483
Ama00484
Ama00485RNA AND EXPORT FACTOR BINDING PROTEIN
Ama00486VASCULAR CELL ADHESION MOLECULE 1
Ama00487BONUS, ISOFORM C-RELATED
Ama00489CYCLIC NUCLEOTIDE PHOSPHODIESTERASE
Ama00491ZINC FINGER SWIM DOMAIN CONTAINING PROTEIN 4, 5, 6
Ama0049240S RIBOSOMAL PROTEIN S14/30S RIBOSOMAL PROTEIN S11
Ama00493RHO FAMILY GTPASE
Ama00494ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED
Ama00495TELOMERE LENGTH AND SILENCING PROTEIN 1 TLS1 FAMILY MEMBER
Ama00496FOLLICULIN FAMILY MEMBER
Ama00498CENTRIOLAR COILED-COIL PROTEIN OF 110 KDA
Ama00499
Ama00500CALCIUM UNIPORTER PROTEIN, MITOCHONDRIAL
Ama00501ARRESTIN DOMAIN CONTAINING PROTEIN
Ama00502VOLTAGE-GATED POTASSIUM CHANNEL
Ama00504
Ama00505G-PROTEIN COUPLED RECEPTOR
Ama00506UNCHARACTERIZED
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