About Archivesica marissinica

The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Archivesica marissinicaMolluscaDeep-Sea ClamHydrothermal vent1,361Haima cold seep in the South China Sea2291877

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM1484369v11.5GbChromosome2020JABXNX01Hong Kong Baptist UniversityPRJNA62989893.50%28,949

References
TitleJournalPubmed ID
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic ClamMolecular Biology and Evolution32956455

Gene Information

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Gene IDDescription
Ama00508TRANSCRIPTIONAL REPRESSOR P66-RELATED
Ama00510
Ama00511TOLL-LIKE RECEPTOR
Ama00513
Ama00515
Ama00516SRCR DOMAIN-CONTAINING PROTEIN
Ama00517SRCR DOMAIN-CONTAINING PROTEIN
Ama00518CADHERIN-87A
Ama00520
Ama00525
Ama00526ATP-DEPENDENT DNA HELICASE
Ama00527ZINC FINGER PROTEIN ZIC AND GLI
Ama00528TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN
Ama00529RAS-RESPONSIVE ELEMENT-BINDING PROTEIN 1
Ama00531UNCHARACTERIZED
Ama00532RIBOSOMAL RNA PROCESSING PROTEIN 7-RELATED
Ama00533N-ALPHA-ACETYLTRANSFERASE 60
Ama00534
Ama00536CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER
Ama00539AXIN
Ama00540RIBONUCLEIC ACID BINDING PROTEIN S1
Ama00541HEPATOCELLULAR CARCINOMA-ASSOCIATED ANTIGEN
Ama00542LD44762P
Ama00546ALPHA-GLUCOSIDASE
Ama00549
Ama00550NUCLEOSOME-REMODELING FACTOR SUBUNIT BPTF
Ama00551
Ama00552NUCLEOSOME-REMODELING FACTOR SUBUNIT BPTF
Ama00553HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED
Ama00554C2 DOMAIN-CONTAINING PROTEIN 5
Ama00556TRANSPOSON
Ama00557ATP-DEPENDENT DNA HELICASE
Ama00558
Ama00559
Ama00560GROUP II PYRIDOXAL-5-PHOSPHATE DECARBOXYLASE
Ama00561
Ama00562NEUROTRANSMITTER GATED ION CHANNEL
Ama00565SYNAPTOGYRIN
Ama00566ZINC FINGER PROTEIN 598
Ama00567LD22376P
Ama00571-
Ama00572VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS25
Ama00573BBSOME-INTERACTING PROTEIN 1
Ama00575
Ama00576ZINC FINGER PROTEIN 207
Ama00577
Ama00579DEOXYRIBONUCLEASE
Ama0058052 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED
Ama00581ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Ama00582EXPRESSED PROTEIN
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