The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama01014 | |
Ama01015 | AMINOTRANSFERASE |
Ama01016 | UNC-13-4A, ISOFORM B |
Ama01017 | UNC-13-4A, ISOFORM B |
Ama01019 | |
Ama01020 | |
Ama01021 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
Ama01023 | SULFATE TRANSPORTER |
Ama01024 | PROTEIN PM1 |
Ama01025 | DEHYDROGENASE/REDUCTASE SDR FAMILY MEMBER 7B |
Ama01026 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
Ama01027 | TEMPTIN |
Ama01028 | 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 3/COP9 SIGNALOSOME COMPLEX SUBUNIT 3 |
Ama01029 | 5'(3')-DEOXYRIBONUCLEOTIDASE |
Ama01031 | TESTIS-EXPRESSED PROTEIN 15 |
Ama01032 | |
Ama01033 | UNCHARACTERIZED |
Ama01035 | GTP-BINDING PROTEIN ALPHA SUBUNIT |
Ama01037 | ALPHA-(1,3)-FUCOSYLTRANSFERASE C-RELATED |
Ama01039 | HEPARAN SULFATE SULFOTRANSFERASE |
Ama01040 | AMINE OXIDASE |
Ama01044 | AMINE OXIDASE |
Ama01045 | RHO FAMILY GTPASE |
Ama01046 | CARBOHYDRATE BINDING DOMAIN CONTAINING PROTEIN |
Ama01047 | TRANSPOSON |
Ama01048 | PARANEOPLASTIC ANTIGEN |
Ama01049 | ENDONUCLEASE-RELATED |
Ama01050 | |
Ama01051 | |
Ama01052 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Ama01053 | SET DOMAIN-CONTAINING PROTEIN-RELATED |
Ama01054 | N-LYSINE METHYLTRANSFERASE KMT5A |
Ama01055 | SET DOMAIN-CONTAINING PROTEIN-RELATED |
Ama01056 | SET DOMAIN-CONTAINING PROTEIN-RELATED |
Ama01057 | |
Ama01058 | |
Ama01059 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama01060 | |
Ama01061 | DELTEX-RELATED |
Ama01062 | |
Ama01063 | |
Ama01065 | MYOSIN LIGHT CHAIN 1, 3 |
Ama01067 | G-PROTEIN COUPLED RECEPTOR |
Ama01068 | FATTY ACID SYNTHASE |
Ama01069 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Ama01070 | - |
Ama01071 | SERINE/THREONINE-PROTEIN PHOSPHATASE 2B CATALYTIC SUBUNIT 1-RELATED |
Ama01072 | ARRESTIN DOMAIN-CONTAINING PROTEIN D |
Ama01073 | UBIQUITIN SPECIFIC PROTEINASE |
Ama01074 |