About Archivesica marissinica

The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Archivesica marissinicaMolluscaDeep-Sea ClamHydrothermal vent1,361Haima cold seep in the South China Sea2291877

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM1484369v11.5GbChromosome2020JABXNX01Hong Kong Baptist UniversityPRJNA62989893.50%28,949

References
TitleJournalPubmed ID
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic ClamMolecular Biology and Evolution32956455

Gene Information

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Gene IDDescription
Ama01137
Ama01138
Ama01139ZINC PHOSPHODIESTERASE ELAC PROTEIN 2
Ama01140ZINC PHOSPHODIESTERASE ELAC PROTEIN 2
Ama01141ADP-RIBOSYLATION-LIKE FACTOR 6-INTERACTING PROTEIN
Ama01142
Ama01143-
Ama01145SPONDIN
Ama01146
Ama01148SLEI FAMILY PROTEIN
Ama01149ALMS1-RELATED
Ama01152
Ama01159TATA ELEMENT MODULATORY FACTOR TMF1
Ama01162
Ama01163EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN
Ama01164THAP DOMAIN PROTEIN
Ama01168
Ama01169
Ama01170
Ama01171
Ama01172
Ama01173
Ama01174ADAMTS A DISINTEGRIN AND METALLOPROTEASE WITH THROMBOSPONDIN MOTIFS PROTEASE
Ama01175CYTOSKELETON-ASSOCIATED PROTEIN 4
Ama01176
Ama01178
Ama01179L1 TRANSPOSABLE ELEMENT-RELATED
Ama01180AP ENDONUCLEASE
Ama01181GUANINE NUCLEOTIDE EXCHANGE FACTOR
Ama01182BANK1/PIK3AP1 FAMILY MEMBER
Ama01184
Ama01185DNA MISMATCH REPAIR PROTEIN MLH, PMS, MUTL
Ama01186DNA MISMATCH REPAIR PROTEIN MLH, PMS, MUTL
Ama01187DNA MISMATCH REPAIR PROTEIN MLH, PMS, MUTL
Ama01188G-PROTEIN COUPLED RECEPTOR
Ama01189MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED
Ama01190DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBER
Ama01191PDZ AND LIM DOMAIN PROTEIN ZASP
Ama01192
Ama01193
Ama01195MED-6-RELATED
Ama01196
Ama01197HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED
Ama01198
Ama01199SERINE/THREONINE-PROTEIN KINASE
Ama01204
Ama01205NEUROLIGIN
Ama01206UNCHARACTERIZED
Ama01207ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED
Ama01209NADH-UBIQUINONE OXIDOREDUCTASE PDSW SUBUNIT
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