About Archivesica marissinica

The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Archivesica marissinicaMolluscaDeep-Sea ClamHydrothermal vent1,361Haima cold seep in the South China Sea2291877

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM1484369v11.5GbChromosome2020JABXNX01Hong Kong Baptist UniversityPRJNA62989893.50%28,949

References
TitleJournalPubmed ID
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic ClamMolecular Biology and Evolution32956455

Gene Information

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Gene IDDescription
Ama01294
Ama01295
Ama01297AGAP007109-PA
Ama01299REPETIN
Ama01300
Ama01302
Ama01303
Ama01304EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN
Ama01305
Ama01306
Ama01307PENTRAXIN
Ama01308
Ama01309-
Ama01310CADHERIN-23
Ama01311
Ama01312
Ama01313N-ACETYLTRANSFERASE-RELATED
Ama01314
Ama01315CADHERIN-23
Ama01316THAP DOMAIN PROTEIN
Ama01317LYSOSOMAL ACID LIPASE-RELATED
Ama01318
Ama01319UNCHARACTERIZED
Ama01320
Ama01321GUANYLYL CYCLASE
Ama01322GUANYLYL CYCLASE
Ama01323HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATED
Ama01324TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL, SUBFAMILY M, MEMBER 6
Ama01325TESMIN/TSO1-RELATED
Ama0132626S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 12/COP9 SIGNALOSOME COMPLEX SUBUNIT 4
Ama01327
Ama01328CXC DOMAIN-CONTAINING PROTEIN-RELATED
Ama01329CXC DOMAIN-CONTAINING PROTEIN-RELATED
Ama01330SODIUM-COUPLED MONOCARBOXYLATE TRANSPORTER
Ama01331
Ama01332ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Ama01333
Ama01334SODIUM-COUPLED MONOCARBOXYLATE TRANSPORTER
Ama01335SODIUM-COUPLED MONOCARBOXYLATE TRANSPORTER
Ama01336
Ama01337
Ama01344SORTING NEXIN-8
Ama01345
Ama01347
Ama01348COILED-COIL DOMAIN-CONTAINING 166
Ama01349
Ama01350MONOCARBOXYLATE TRANSPORTER
Ama01351
Ama01352CXC DOMAIN-CONTAINING PROTEIN-RELATED
Ama01353TRANSPOSON
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