The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama01495 | LEUCOKININ RECEPTOR-RELATED |
Ama01496 | LEUCOKININ RECEPTOR-RELATED |
Ama01497 | |
Ama01498 | |
Ama01500 | DILUTE DOMAIN-CONTAINING PROTEIN YPR089W |
Ama01501 | 30S 40S RIBOSOMAL PROTEIN |
Ama01502 | UNCHARACTERIZED |
Ama01504 | - |
Ama01505 | UNCHARACTERIZED |
Ama01506 | UNCHARACTERIZED |
Ama01507 | |
Ama01508 | SET1/ASH2 HISTONE METHYLTRANSFERASE COMPLEX SUBUNIT ASH2 |
Ama01510 | CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR SUBUNIT 4-RELATED |
Ama01511 | PETER PAN-RELATED |
Ama01512 | ALPHA- 1,3 -FUCOSYLTRANSFERASE |
Ama01513 | TEKTIN |
Ama01514 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Ama01515 | HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN-RELATED |
Ama01516 | MPS ONE BINDER KINASE ACTIVATOR-LIKE MOB |
Ama01517 | AMINO ACID TRANSPORTER |
Ama01518 | ARGININE DEMETHYLASE AND LYSYL-HYDROXYLASE JMJD |
Ama01519 | |
Ama01520 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama01521 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Ama01522 | CDGSH IRON-SULFUR DOMAIN-CONTAINING PROTEIN 1 |
Ama01523 | CDGSH IRON-SULFUR DOMAIN-CONTAINING PROTEIN 1 |
Ama01524 | |
Ama01525 | TRANSPOSABLE ELEMENT-RELATED |
Ama01526 | ADRENERGIC RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR |
Ama01527 | BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, TWIST |
Ama01529 | ALPHA-(1,3)-FUCOSYLTRANSFERASE C-RELATED |
Ama01530 | PHOSPHATIDYLINOSITOL TRANSFER PROTEIN |
Ama01531 | 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 12/COP9 SIGNALOSOME COMPLEX SUBUNIT 4 |
Ama01532 | LIPOMA HMGIC FUSION PARTNER-LIKE PROTEIN |
Ama01533 | PROKARYOTIC DNA TOPOISOMERASE |
Ama01534 | |
Ama01537 | |
Ama01538 | PROTEIN CCSMST1 |
Ama01539 | |
Ama01540 | AAA DOMAIN-CONTAINING |
Ama01541 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Ama01543 | ZINC FINGER PROTEIN |
Ama01545 | HECT DOMAIN UBIQUITIN-PROTEIN LIGASE |
Ama01549 | HECT DOMAIN UBIQUITIN-PROTEIN LIGASE |
Ama01551 | |
Ama01552 | ZINC FINGER PROTEIN |
Ama01553 | UNCHARACTERIZED |
Ama01554 | UNCHARACTERIZED |
Ama01556 | |
Ama01557 | - |