The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama01622 | UNCHARACTERIZED |
Ama01623 | |
Ama01624 | THAP DOMAIN PROTEIN |
Ama01625 | |
Ama01626 | TEX2 PROTEIN-RELATED |
Ama01627 | |
Ama01629 | |
Ama01630 | |
Ama01632 | |
Ama01633 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
Ama01634 | |
Ama01635 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
Ama01636 | |
Ama01637 | |
Ama01638 | PHOSPHOMANNOMUTASE |
Ama01639 | PUTATIVE-RELATED |
Ama01640 | GUANYL-NUCLEOTIDE EXCHANGE FACTOR |
Ama01641 | BETA-TUBULIN COFACTOR D |
Ama01642 | |
Ama01643 | |
Ama01644 | |
Ama01645 | MACROGLOBULIN / COMPLEMENT |
Ama01646 | PROTEIN-COUPLED RECEPTOR GPR1, PUTATIVE-RELATED |
Ama01647 | |
Ama01649 | DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC2 |
Ama01650 | |
Ama01651 | TATA-BOX BINDING PROTEIN |
Ama01652 | FMRFAMIDE RECEPTOR-RELATED |
Ama01653 | G-PROTEIN COUPLED RECEPTOR |
Ama01654 | |
Ama01655 | LITHOSTATHINE |
Ama01656 | ACYL CARRIER PROTEIN |
Ama01657 | ANNEXIN |
Ama01658 | POLYCOMB GROUP PROTEIN |
Ama01659 | MICRO-RNA BINDING ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 7 |
Ama01660 | TETRATRICOPEPTIDE REPEAT PROTEIN 1 |
Ama01661 | S PHASE CYCLIN A-ASSOCIATED PROTEIN IN THE ENDOPLASMIC RETICULUM |
Ama01663 | S PHASE CYCLIN A-ASSOCIATED PROTEIN IN THE ENDOPLASMIC RETICULUM |
Ama01665 | LP21163P |
Ama01666 | RNA AND EXPORT FACTOR BINDING PROTEIN |
Ama01668 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Ama01669 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Ama01673 | TRANSMEMBRANE CHANNEL-RELATED |
Ama01674 | TRANSMEMBRANE CHANNEL-RELATED |
Ama01675 | TRANSMEMBRANE CHANNEL-RELATED |
Ama01676 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama01677 | |
Ama01678 | CEREBELLIN-RELATED |
Ama01679 | SYNAPTOTAGMIN |
Ama01680 |