The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama01558 | NY-REN-58 ANTIGEN |
Ama01559 | N-ACETYLGLUCOSAMINE-6-SULFATASE FAMILY MEMBER |
Ama01560 | |
Ama01561 | |
Ama01562 | |
Ama01563 | |
Ama01564 | SULFATE TRANSPORTER |
Ama01567 | |
Ama01568 | SODIUM/CALCIUM EXCHANGER |
Ama01569 | |
Ama01570 | SODIUM/CALCIUM EXCHANGER |
Ama01571 | |
Ama01572 | |
Ama01574 | VON WILLEBRAND FACTOR A DOMAIN-CONTAINING PROTEIN 3A |
Ama01575 | VON WILLEBRAND FACTOR A DOMAIN-CONTAINING PROTEIN 3A |
Ama01576 | THIOREDOXIN |
Ama01577 | SOLUTE CARRIER FAMILY 25 |
Ama01578 | SOLUTE CARRIER FAMILY 25 |
Ama01580 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Ama01581 | ZINC-FINGER PROTEIN NOLZ1-RELATED |
Ama01582 | ZINC-FINGER PROTEIN NOLZ1-RELATED |
Ama01585 | WINGS APART-LIKE PROTEIN HOMOLOG |
Ama01586 | WINGS APART-LIKE PROTEIN HOMOLOG |
Ama01587 | DIMETHYLANILINE MONOOXYGENASE |
Ama01588 | DIMETHYLANILINE MONOOXYGENASE |
Ama01589 | MONOCARBOXYLATE TRANSPORTER |
Ama01590 | GLUTATHIONE REDUCTASE |
Ama01593 | LITHOSTATHINE |
Ama01595 | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 7 |
Ama01596 | UNCHARACTERIZED |
Ama01597 | 40S RIBOSOMAL PROTEIN SA |
Ama01598 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Ama01599 | TOLL-LIKE RECEPTOR |
Ama01600 | SET DOMAIN-CONTAINING PROTEIN-RELATED |
Ama01601 | TUBULIN |
Ama01603 | - |
Ama01605 | |
Ama01606 | UNCHARACTERIZED |
Ama01607 | POLYCOMB GROUP PROTEIN |
Ama01608 | TOLL-LIKE RECEPTOR |
Ama01609 | GLYCOSYL TRANSFERASE |
Ama01610 | |
Ama01611 | FGF RECEPTOR ACTIVATING PROTEIN 1 |
Ama01612 | |
Ama01613 | SGNH_HYDRO DOMAIN-CONTAINING PROTEIN |
Ama01614 | ZINC FINGER PROTEIN |
Ama01615 | BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE |
Ama01616 | NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR |
Ama01619 | NEUROPEPTIDE Y RECEPTOR |
Ama01621 | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE |