The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama01747 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama01748 | |
Ama01749 | EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED |
Ama01750 | 39S RIBOSOMAL PROTEIN L12 |
Ama01751 | |
Ama01752 | SERINE HYDROXYMETHYLTRANSFERASE |
Ama01753 | MYOSIN |
Ama01755 | MYOSIN VII, XV |
Ama01756 | |
Ama01757 | RNA-BINDING PROTEIN RELATED |
Ama01758 | PUTATIVE-RELATED |
Ama01759 | DNA-DIRECTED RNA POLYMERASE |
Ama01760 | |
Ama01761 | |
Ama01762 | |
Ama01763 | PRE-MRNA-SPLICING FACTOR RBM22 |
Ama01764 | WD-REPEAT PROTEIN INTERACTING WITH PHOSPHOINOSIDES WIPI -RELATED |
Ama01765 | AT29763P-RELATED |
Ama01766 | |
Ama01767 | RNA-BINDING PROTEIN |
Ama01768 | MITOCHONDRIAL DICARBOXYLATE CARRIER-RELATED |
Ama01770 | |
Ama01771 | FAS-ASSOCIATING DEATH DOMAIN-CONTAINING PROTEIN FADD |
Ama01772 | |
Ama01773 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Ama01774 | PUTATIVE-RELATED |
Ama01775 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Ama01776 | |
Ama01777 | |
Ama01778 | |
Ama01779 | OLIGORIBONUCLEASE, MITOCHONDRIAL |
Ama01780 | |
Ama01781 | |
Ama01782 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Ama01783 | |
Ama01784 | MULTI-COPPER OXIDASE |
Ama01785 | PROGRAMMED CELL DEATH PROTEIN 2-LIKE |
Ama01786 | ODD-SKIPPED - RELATED |
Ama01787 | SPARC OSTEONECTIN |
Ama01788 | ERLIN (ER LIPID RAFT ASSOCIATED PROTEIN) HOMOLOG |
Ama01789 | ZINC FINGER PROTEIN 142 |
Ama01791 | DED DOMAIN-CONTAINING PROTEIN |
Ama01792 | ALPHA-2-MACROGLOBULIN RECEPTOR-ASSOCIATED PROTEIN |
Ama01793 | TRANSPOSON |
Ama01794 | |
Ama01795 | UNCHARACTERIZED |
Ama01796 | |
Ama01797 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama01799 | HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED |
Ama01800 | SNF2/RAD54 FAMILY MEMBER |