The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama01861 | INACTIVE RHOMBOID PROTEIN |
Ama01862 | INACTIVE RHOMBOID PROTEIN |
Ama01863 | |
Ama01864 | DNA REPLICATION-RELATED ELEMENT FACTOR, ISOFORM A |
Ama01866 | ECDYSONE-INDUCIBLE GENE E1, ISOFORM A |
Ama01869 | UNCHARACTERIZED |
Ama01871 | VOLTAGE-DEPENDENT CALCIUM CHANNEL GAMMA SUBUNIT |
Ama01872 | NEUROPEPTIDES RECEPTOR |
Ama01875 | HEPATOCYTE GROWTH FACTOR-REGULATED TYROSINE KINASE SUBSTRATE |
Ama01876 | UNCHARACTERIZED |
Ama01877 | ADP-RIBOSYLATION FACTOR-LIKE PROTEIN 16 |
Ama01878 | KELCH PROTEIN |
Ama01879 | NUCLEOTIDYLTRANSFERASE |
Ama01880 | NUCLEOTIDYLTRANSFERASE |
Ama01881 | |
Ama01882 | |
Ama01884 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama01885 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama01886 | VON WILLEBRAND FACTOR A DOMAIN-CONTAINING PROTEIN 5A |
Ama01887 | VON WILLEBRAND FACTOR A DOMAIN-CONTAINING PROTEIN 5A |
Ama01888 | |
Ama01889 | LIPOPOLYSACCHARIDE-INDUCED TUMOR NECROSIS FACTOR-ALPHA FACTOR |
Ama01891 | ATP-DEPENDENT DNA HELICASE |
Ama01892 | DETERIN |
Ama01893 | SEC24-RELATED PROTEIN |
Ama01894 | CADHERIN-23 |
Ama01898 | ARM REPEAT SUPERFAMILY PROTEIN |
Ama01899 | CYTOCHROME B-245 CHAPERONE 1 |
Ama01900 | UNCHARACTERIZED |
Ama01901 | CADHERIN-87A |
Ama01905 | WD40 REPEAT DOMAIN 95 |
Ama01907 | CHROMOSOME 16 OPEN READING FRAME 96 |
Ama01910 | METHYLTRANSFERASE-RELATED |
Ama01911 | UNCHARACTERIZED |
Ama01912 | UNCHARACTERIZED |
Ama01913 | DNA-DIRECTED RNA POLYMERASE III |
Ama01914 | MULTIPLE INOSITOL POLYPHOSPHATE PHOSPHATASE-RELATED |
Ama01916 | |
Ama01920 | UNCHARACTERIZED |
Ama01922 | EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN |
Ama01923 | THAP DOMAIN PROTEIN |
Ama01924 | |
Ama01925 | PROTEIN FAM78A |
Ama01926 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Ama01927 | - |
Ama01929 | CELL FATE DETERMINING PROTEIN MAB21-RELATED |
Ama01931 | UNCHARACTERIZED |
Ama01934 | |
Ama01935 | |
Ama01936 |