The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama02022 | REGULATOR COMPLEX PROTEIN LAMTOR3 |
Ama02023 | IQ DOMAIN-CONTAINING PROTEIN K |
Ama02024 | UNCHARACTERIZED |
Ama02028 | E3 UBIQUITIN-PROTEIN LIGASE RING1 / RING 2 FAMILY MEMBER |
Ama02030 | ZINC FINGER PROTEIN |
Ama02033 | COILED-COIL DOMAIN-CONTAINING PROTEIN 154 |
Ama02034 | |
Ama02035 | GLUTAMATE-RICH WD REPEAT-CONTAINING PROTEIN 1 |
Ama02036 | ANKYRIN REPEAT FAMILY A |
Ama02037 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama02038 | |
Ama02039 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Ama02040 | PUTATIVE-RELATED |
Ama02041 | THAP DOMAIN PROTEIN |
Ama02042 | ATP-DEPENDENT DNA HELICASE |
Ama02043 | |
Ama02044 | |
Ama02045 | HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED |
Ama02046 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama02047 | |
Ama02048 | |
Ama02049 | CASPASE |
Ama02051 | |
Ama02052 | COILED-COIL DOMAIN-CONTAINING PROTEIN 57 |
Ama02053 | |
Ama02054 | ATAXIA TELANGIECTASIA MUTATED ATM -RELATED |
Ama02055 | |
Ama02056 | ATAXIA TELANGIECTASIA MUTATED ATM -RELATED |
Ama02057 | |
Ama02058 | |
Ama02062 | |
Ama02063 | NEUROTRANSMITTER GATED ION CHANNEL |
Ama02064 | NEUROTRANSMITTER GATED ION CHANNEL |
Ama02066 | UNCHARACTERIZED |
Ama02067 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama02096 | PHD FINGER TRANSCRIPTION FACTOR |
Ama02098 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Ama02099 | |
Ama02100 | |
Ama02105 | ALPHA-MANNOSIDASE |
Ama02106 | POLYCYSTIN FAMILY MEMBER |
Ama02107 | POLYCYSTIN FAMILY MEMBER |
Ama02108 | POLYCYSTIN FAMILY MEMBER |
Ama02109 | |
Ama02110 | METALLO PHOSPHOESTERASE RELATED |
Ama02111 | PROTEIN CBG22215 |
Ama02112 | TMEM26 PROTEIN |
Ama02113 | UNCHARACTERIZED |
Ama02115 | |
Ama02116 | ULP_PROTEASE DOMAIN-CONTAINING PROTEIN |