The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama02240 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Ama02241 | RHO FAMILY GTPASE |
Ama02242 | RHO FAMILY GTPASE |
Ama02243 | |
Ama02244 | RHO FAMILY GTPASE |
Ama02245 | RHO FAMILY GTPASE |
Ama02246 | RHO FAMILY GTPASE |
Ama02247 | |
Ama02248 | RHO FAMILY GTPASE |
Ama02249 | RHO FAMILY GTPASE |
Ama02251 | |
Ama02252 | RHO FAMILY GTPASE |
Ama02253 | RHO FAMILY GTPASE |
Ama02254 | |
Ama02255 | EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN |
Ama02256 | |
Ama02257 | VOLTAGE-DEPENDENT CALCIUM CHANNEL TYPE A SUBUNIT ALPHA-1 |
Ama02258 | VOLTAGE-GATED CATION CHANNEL CALCIUM AND SODIUM |
Ama02259 | VOLTAGE-GATED CATION CHANNEL CALCIUM AND SODIUM |
Ama02260 | VOLTAGE-GATED CATION CHANNEL CALCIUM AND SODIUM |
Ama02262 | CHITINASE |
Ama02263 | CHITINASE |
Ama02265 | ZINC FINGER PROTEIN |
Ama02266 | ZGC:172139 |
Ama02267 | KU AUTOANTIGEN DNA HELICASE |
Ama02268 | AATF PROTEIN APOPTOSIS ANTAGONIZING TRANSCRIPTION FACTOR |
Ama02269 | UNCHARACTERIZED |
Ama02271 | PROTEIN DISULFIDE ISOMERASE |
Ama02272 | |
Ama02274 | GLUTATHIONE PEROXIDASE |
Ama02275 | GLUTATHIONE PEROXIDASE |
Ama02276 | |
Ama02277 | AMINO ACID TRANSPORTER |
Ama02278 | THAP DOMAIN PROTEIN |
Ama02279 | ACROSIN-RELATED |
Ama02280 | ARGININE DEMETHYLASE AND LYSYL-HYDROXYLASE JMJD |
Ama02281 | |
Ama02282 | ARGININE DEMETHYLASE AND LYSYL-HYDROXYLASE JMJD |
Ama02283 | IFT140/172-RELATED |
Ama02284 | GLUCOSAMINE--FRUCTOSE-6-PHOSPHATE AMINOTRANSFERASE, ISOMERIZING |
Ama02285 | DNA POLYMERASE TYPE-X FAMILY MEMBER |
Ama02290 | DNA POLYMERASE TYPE-X FAMILY MEMBER |
Ama02291 | MASK PROTEIN |
Ama02293 | INHIBITOR OF APOPTOSIS |
Ama02294 | COPINE FAMILY PROTEIN 1 |
Ama02295 | |
Ama02297 | COPINE FAMILY PROTEIN 1 |
Ama02298 | |
Ama02299 | COPINE FAMILY PROTEIN 1 |
Ama02300 |