The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama02429 | |
Ama02432 | |
Ama02433 | THAP DOMAIN PROTEIN |
Ama02434 | |
Ama02435 | |
Ama02436 | |
Ama02437 | SOLUTE CARRIER FAMILY 43 MEMBER 3-RELATED |
Ama02438 | SOLUTE CARRIER FAMILY 43 MEMBER 3-RELATED |
Ama02439 | PHYTANOYL-COA DIOXYGENASE DOMAIN CONTAINING 1 |
Ama02440 | TRANSPOSON |
Ama02441 | |
Ama02442 | |
Ama02443 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama02444 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama02445 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Ama02446 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama02447 | |
Ama02448 | G-PROTEIN COUPLED RECEPTOR TKR-1-RELATED |
Ama02449 | |
Ama02450 | |
Ama02451 | |
Ama02452 | ZNF44 PROTEIN |
Ama02453 | |
Ama02454 | RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR |
Ama02455 | RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR |
Ama02456 | RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR |
Ama02457 | ATILLA, ISOFORM B-RELATED-RELATED |
Ama02459 | |
Ama02463 | SI:CH211-266K2.1 |
Ama02465 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama02467 | HISTONE H2A |
Ama02468 | GALACTOSE-3-O-SULFOTRANSFERASE |
Ama02469 | TRANSFERASE, PUTATIVE-RELATED |
Ama02470 | TRANSFERASE, PUTATIVE-RELATED |
Ama02471 | ZGC:195170 |
Ama02472 | TESTICULAR SOLUBLE ADENYLYL CYCLASE |
Ama02473 | |
Ama02474 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama02475 | |
Ama02476 | PROTEIN KINASE DOMAIN-CONTAINING PROTEIN |
Ama02480 | BONE MORPHOGENETIC PROTEIN INHIBITOR, NOGGIN |
Ama02481 | UNCHARACTERIZED |
Ama02483 | NUCLEAR HORMONE RECEPTOR |
Ama02484 | TRNA-SPLICING ENDONUCLEASE SUBUNIT SEN54 |
Ama02486 | PROTEIN CBG12474 |
Ama02488 | RHO FAMILY GTPASE |
Ama02490 | EXS-RELATED PROTEIN |
Ama02491 | |
Ama02492 | |
Ama02493 |