The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama02494 | SERINE/THREONINE-PROTEIN KINASE SBK1 |
Ama02495 | |
Ama02497 | 28 KDA HEAT- AND ACID-STABLE PHOSPHOPROTEIN PDGF-ASSOCIATED PROTEIN |
Ama02498 | PROTEIN BUD31-RELATED |
Ama02499 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama02500 | ARRESTIN DOMAIN-CONTAINING PROTEIN D |
Ama02503 | BLUE CHEESE |
Ama02504 | G-PROTEIN COUPLED RECEPTOR |
Ama02505 | |
Ama02506 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Ama02507 | SORTING NEXIN-29-RELATED |
Ama02508 | SERINE/THREONINE-PROTEIN KINASE |
Ama02509 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Ama02511 | EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN |
Ama02512 | THAP DOMAIN PROTEIN |
Ama02514 | |
Ama02516 | |
Ama02518 | MYOCARDIN-RELATED TRANSCRIPTION FACTOR-RELATED |
Ama02519 | |
Ama02520 | |
Ama02521 | DNA2/NAM7 HELICASE FAMILY |
Ama02522 | UNCHARACTERIZED |
Ama02523 | 60S RIBOSOMAL PROTEIN L10 |
Ama02524 | NUCLEAR MOVEMENT PROTEIN NUDC |
Ama02525 | NEGATIVE REGULATOR OF VESICLE FORMATION-RELATED |
Ama02526 | |
Ama02527 | SPARC OSTEONECTIN |
Ama02528 | |
Ama02529 | |
Ama02530 | |
Ama02531 | |
Ama02532 | |
Ama02533 | TRINUCLEOTIDE REPEAT-CONTAINING GENE 6 |
Ama02535 | BOLA TRANSCRIPTION REGULATOR |
Ama02536 | TRNA-DIHYDROURIDINE SYNTHASE |
Ama02537 | VACUOLAR PROTON ATPASES |
Ama02540 | TRANSPOSON |
Ama02541 | |
Ama02542 | HEPARAN SULFATE SULFOTRANSFERASE |
Ama02543 | |
Ama02544 | |
Ama02545 | PROTEIN CBG22215 |
Ama02546 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Ama02547 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama02548 | |
Ama02549 | |
Ama02551 | FLAVIN MONOAMINE OXIDASE |
Ama02553 | POLYCYSTIN FAMILY MEMBER |
Ama02554 | |
Ama02555 | P25 ALPHA-RELATED |