The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama02558 | |
Ama02559 | |
Ama02560 | |
Ama02561 | UNCHARACTERIZED |
Ama02562 | |
Ama02563 | UNCHARACTERIZED |
Ama02564 | PROTEIN SIDEKICK |
Ama02565 | CASPASE RECRUITMENT DOMAIN-CONTAINING PROTEIN 18 |
Ama02566 | CASPASE |
Ama02567 | ALCOHOL DEHYDROGENASE |
Ama02568 | |
Ama02569 | CASPASE RECRUITMENT DOMAIN-CONTAINING PROTEIN 18 |
Ama02570 | ALCOHOL DEHYDROGENASE |
Ama02571 | ELONGATOR COMPLEX PROTEIN 6 |
Ama02572 | EPITHELIAL MEMBRANE PROTEIN-RELATED |
Ama02573 | PUTATIVE-RELATED |
Ama02574 | CHONDROITIN SYNTHASE |
Ama02578 | RE74312P |
Ama02579 | MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S24 |
Ama02580 | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 -RELATED |
Ama02581 | |
Ama02583 | WD-REPEAT PROTEIN INTERACTING WITH PHOSPHOINOSIDES WIPI -RELATED |
Ama02584 | ENOYL-COA HYDRATASE-RELATED |
Ama02585 | FAS-ASSOCIATED PROTEIN |
Ama02586 | S-ADENOSYLMETHIONINE SYNTHETASE |
Ama02587 | S-ADENOSYLMETHIONINE SYNTHETASE |
Ama02588 | DIPHTHINE METHYLTRANSFERASE |
Ama02589 | UNCHARACTERIZED |
Ama02590 | G-PROTEIN COUPLED RECEPTOR |
Ama02591 | SODIUM-COUPLED MONOCARBOXYLATE TRANSPORTER |
Ama02593 | |
Ama02594 | NEUROPEPTIDE Y RECEPTOR |
Ama02598 | 26S PROTESOME SUBUNIT 6 |
Ama02599 | 26S PROTESOME SUBUNIT 6 |
Ama02600 | |
Ama02601 | TESTIS-EXPRESSED PROTEIN 47 |
Ama02602 | BAT4 PROTEIN-RELATED |
Ama02603 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Ama02604 | SERINE-THREONINE PROTEIN KINASE |
Ama02605 | |
Ama02606 | |
Ama02607 | |
Ama02608 | DYNEIN HEAVY CHAIN |
Ama02609 | DYNEIN HEAVY CHAIN |
Ama02610 | MALE FERTILITY FACTOR KL5 |
Ama02611 | |
Ama02613 | GAMMA GLUTAMYL TRANSPEPTIDASE |
Ama02614 | TRANSMEMBRANE PROTEIN 107 |
Ama02616 | RAPSYN-RELATED |
Ama02620 |