The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama02696 | |
Ama02697 | |
Ama02700 | UNCHARACTERIZED |
Ama02702 | MATRIX PROTEIN, PUTATIVE-RELATED |
Ama02704 | MATRIX PROTEIN, PUTATIVE-RELATED |
Ama02706 | PEPTIDOGLYCAN RECOGNITION PROTEIN |
Ama02707 | |
Ama02708 | MATRIX PROTEIN, PUTATIVE-RELATED |
Ama02709 | MATRIX PROTEIN, PUTATIVE-RELATED |
Ama02710 | LUPUS LA PROTEIN-RELATED |
Ama02712 | ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED |
Ama02713 | TYROSINE-PROTEIN PHOSPHATASE NON-RECEPTOR TYPE 13 |
Ama02714 | STG PROTEIN |
Ama02715 | STG PROTEIN |
Ama02716 | TYROSINE-PROTEIN PHOSPHATASE NON-RECEPTOR TYPE 13 |
Ama02717 | TRANSLATION FACTOR |
Ama02718 | RNA-BINDING PROTEIN LUC7-RELATED |
Ama02719 | METHYLTRANSFERASE-LIKE PROTEIN 24 |
Ama02720 | UNKEMPT FAMILY MEMBER |
Ama02728 | ANNEXIN |
Ama02729 | ANNEXIN |
Ama02731 | D-ERYTHRULOSE REDUCTASE |
Ama02732 | PROTEIN FAM220A |
Ama02733 | |
Ama02734 | ECTONUCLEOTIDE PYROPHOSPHATASE/PHOSPHODIESTERASE |
Ama02735 | |
Ama02738 | NETRIN/LAMININ-RELATED |
Ama02739 | NETRIN/LAMININ-RELATED |
Ama02741 | ALPHA-GLUCOSIDASE |
Ama02742 | BETA-LACTAMASE-RELATED |
Ama02744 | |
Ama02745 | CHLORIDE CHANNEL PROTEIN 2 |
Ama02746 | LEUCINE RICH REPEAT FAMILY PROTEIN |
Ama02747 | PEPTIDASE |
Ama02748 | 2-HYDROXYACID DEHYDROGENASE-RELATED |
Ama02749 | |
Ama02750 | TRANSPOSABLE ELEMENT-RELATED |
Ama02751 | NEUROPEPTIDE Y RECEPTOR |
Ama02755 | G-PROTEIN COUPLED RECEPTOR |
Ama02756 | CALPAIN |
Ama02759 | GEM-ASSOCIATED PROTEIN 6 |
Ama02760 | MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION, SUBUNIT 9 |
Ama02762 | UBIQUITIN DOMAIN-CONTAINING PROTEIN UBFD1 |
Ama02764 | MOLTING PROTEIN MLT-4 |
Ama02768 | |
Ama02774 | |
Ama02775 | IKB KINASE |
Ama02776 | DYNACTIN SUBUNIT 5 |
Ama02777 | |
Ama02778 | PROTEIN HID1 |