The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama02787 | INHIBITOR OF APOPTOSIS |
Ama02788 | G-PROTEIN COUPLED RECEPTOR |
Ama02790 | G-PROTEIN COUPLED RECEPTOR |
Ama02793 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama02794 | |
Ama02795 | G-PROTEIN COUPLED RECEPTOR |
Ama02796 | |
Ama02799 | DOM-3 RELATED |
Ama02802 | DUAL SPECIFICITY MITOGEN-ACTIVATED PROTEIN KINASE KINASE 5-RELATED |
Ama02807 | CELL DIVISION PROTEIN KINASE |
Ama02809 | |
Ama02810 | RASSF |
Ama02812 | TRANSPOSON |
Ama02822 | FORKHEAD BOX PROTEIN J1 |
Ama02823 | |
Ama02825 | ADIPOGENESIS REGULATORY FACTOR |
Ama02826 | EXOCYST COMPLEX PROTEIN EXO70 |
Ama02828 | |
Ama02829 | WW DOMAIN-BINDING PROTEIN 11 |
Ama02831 | METHIONINE AMINOPEPTIDASE |
Ama02832 | DNA LIGASE 1/3 FAMILY MEMBER |
Ama02834 | G-PROTEIN COUPLED RECEPTOR TKR-1-RELATED |
Ama02837 | G-PROTEIN COUPLED RECEPTOR |
Ama02838 | |
Ama02839 | MAP/MICROTUBULE AFFINITY-REGULATING KINASE |
Ama02840 | ADENYLATE CYCLASE TYPE 1 |
Ama02841 | |
Ama02842 | INHIBITOR OF APOPTOSIS |
Ama02844 | |
Ama02845 | CAMP-DEPENDENT PROTEIN KINASE REGULATORY CHAIN |
Ama02848 | |
Ama02850 | |
Ama02852 | METHIONINE AMINOPEPTIDASE |
Ama02853 | BETA-HEXOSAMINIDASE |
Ama02854 | |
Ama02855 | BETA-HEXOSAMINIDASE |
Ama02856 | BETA-HEXOSAMINIDASE |
Ama02857 | |
Ama02858 | BETA-HEXOSAMINIDASE |
Ama02859 | |
Ama02860 | BETA-HEXOSAMINIDASE |
Ama02861 | BETA-HEXOSAMINIDASE |
Ama02862 | |
Ama02864 | FAM187 |
Ama02865 | FAM187 |
Ama02866 | |
Ama02867 | TRANSPOSABLE ELEMENT-RELATED |
Ama02868 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama02869 | IG-LIKE DOMAIN-CONTAINING PROTEIN-RELATED |
Ama02871 | - |