The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama02363 | |
Ama02364 | |
Ama02366 | THAP DOMAIN PROTEIN |
Ama02367 | |
Ama02368 | B9 DOMAIN-CONTAINING |
Ama02369 | |
Ama02370 | |
Ama02371 | POLYCYSTIN-1 |
Ama02372 | POLYCYSTIN-1 |
Ama02373 | POLYCYSTIN-1 |
Ama02374 | - |
Ama02375 | MITOCHONDRIAL DICARBOXYLATE CARRIER-RELATED |
Ama02376 | |
Ama02377 | BETA TRANSDUCIN-RELATED PROTEIN |
Ama02379 | |
Ama02380 | TRANSCRIPTION FACTOR 7 FAMILY MEMBER |
Ama02382 | INORGANIC PYROPHOSPHATASE |
Ama02383 | CERAMIDASE |
Ama02385 | MIP08469P |
Ama02387 | MIP08469P |
Ama02388 | |
Ama02389 | SOLUTE CARRIER FAMILY 22 MEMBER |
Ama02390 | CEREBELLIN-RELATED |
Ama02392 | |
Ama02393 | SAPOSIN-RELATED |
Ama02395 | PUTATIVE-RELATED |
Ama02396 | |
Ama02397 | |
Ama02399 | BASIC HELIX-LOOP-HELIX PROTEIN NEUROGENIN-RELATED |
Ama02400 | BASIC HELIX-LOOP-HELIX PROTEIN NEUROGENIN-RELATED |
Ama02401 | DYNEIN HEAVY CHAIN 1, AXONEMAL-LIKE PROTEIN |
Ama02402 | DYNEIN HEAVY CHAIN 1, AXONEMAL-LIKE PROTEIN |
Ama02403 | DYNEIN HEAVY CHAIN |
Ama02405 | DYNEIN HEAVY CHAIN 1, AXONEMAL-LIKE PROTEIN |
Ama02407 | DYNEIN HEAVY CHAIN 1, AXONEMAL-LIKE PROTEIN |
Ama02408 | ATILLA, ISOFORM B-RELATED-RELATED |
Ama02409 | |
Ama02410 | ATILLA, ISOFORM B-RELATED-RELATED |
Ama02413 | LOC100145250 PROTEIN |
Ama02414 | KNIRPS-RELATED PROTEIN-RELATED |
Ama02415 | RIBOSOMAL PROTEIN L17 |
Ama02416 | (E3-INDEPENDENT) E2 UBIQUITIN-CONJUGATING ENZYME |
Ama02417 | TYROSINE-PROTEIN KINASE RECEPTOR |
Ama02418 | |
Ama02419 | |
Ama02422 | EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN |
Ama02423 | THAP DOMAIN PROTEIN |
Ama02425 | |
Ama02426 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama02427 | FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) |