The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
| Gene ID | Description |
|---|---|
| Ama02179 | |
| Ama02180 | ETHANOLAMINE-PHOSPHATE CYTIDYLYLTRANSFERASE |
| Ama02181 | |
| Ama02182 | |
| Ama02184 | WD REPEAT PROTEIN |
| Ama02185 | MONOCARBOXYLATE TRANSPORTER |
| Ama02186 | PROTEIN PAXX |
| Ama02187 | (E3-INDEPENDENT) E2 UBIQUITIN-CONJUGATING ENZYME |
| Ama02188 | - |
| Ama02189 | |
| Ama02190 | DYNACTIN 1-RELATED MICROTUBULE-BINDING |
| Ama02191 | ZGC:174356 |
| Ama02192 | ZGC:174356 |
| Ama02193 | |
| Ama02194 | ZGC:174356 |
| Ama02196 | ZINC FINGER AND BTB DOMAIN-CONTAINING |
| Ama02199 | PROTEIN BRICK1 |
| Ama02200 | RENTINAL DEGENERATION 3-LIKE |
| Ama02201 | SYNAPTOTAGMIN |
| Ama02204 | ADAPTIN, ALPHA/GAMMA/EPSILON |
| Ama02205 | TRANSPOSABLE ELEMENT-RELATED |
| Ama02207 | GUANYLYL CYCLASE |
| Ama02208 | |
| Ama02209 | |
| Ama02211 | ALPHA- 1,3 -FUCOSYLTRANSFERASE |
| Ama02212 | |
| Ama02214 | |
| Ama02215 | RHO FAMILY GTPASE |
| Ama02216 | DNA POLYMERASE |
| Ama02217 | |
| Ama02218 | RHO FAMILY GTPASE |
| Ama02219 | RHO FAMILY GTPASE |
| Ama02221 | RHO FAMILY GTPASE |
| Ama02222 | |
| Ama02223 | RHO FAMILY GTPASE |
| Ama02224 | |
| Ama02225 | DNA POLYMERASE |
| Ama02226 | RHO FAMILY GTPASE |
| Ama02227 | RHO FAMILY GTPASE |
| Ama02228 | RHO FAMILY GTPASE |
| Ama02229 | DNA POLYMERASE |
| Ama02230 | HEH2P |
| Ama02231 | RHO FAMILY GTPASE |
| Ama02233 | |
| Ama02234 | PEPTIDASE |
| Ama02235 | RHO FAMILY GTPASE |
| Ama02236 | RHO FAMILY GTPASE |
| Ama02237 | RHO FAMILY GTPASE |
| Ama02238 | RHO FAMILY GTPASE |
| Ama02239 |
