The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama02992 | |
Ama02993 | POTE ANKYRIN DOMAIN |
Ama02994 | RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR |
Ama02995 | INHIBITOR OF APOPTOSIS |
Ama02996 | |
Ama02999 | BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE |
Ama03000 | |
Ama03001 | |
Ama03002 | G-PROTEIN COUPLED RECEPTOR |
Ama03003 | |
Ama03004 | LD39211P |
Ama03005 | |
Ama03006 | LD39211P |
Ama03008 | LD39211P |
Ama03009 | LD39211P |
Ama03010 | |
Ama03011 | |
Ama03012 | LD39211P |
Ama03015 | PARANEOPLASTIC ANTIGEN |
Ama03016 | PARANEOPLASTIC ANTIGEN |
Ama03017 | TESTIS-EXPRESSED PROTEIN 26 ISOFORM X3 |
Ama03019 | RHO-GTPASE-ACTIVATING PROTEIN 6 FAMILY MEMBER |
Ama03020 | LEUCINE RICH REPEAT FAMILY PROTEIN |
Ama03021 | SERINE PROTEASE INHIBITOR, SERPIN |
Ama03022 | |
Ama03023 | BONUS, ISOFORM C-RELATED |
Ama03025 | BONUS, ISOFORM C-RELATED |
Ama03026 | G-PROTEIN COUPLED RECEPTOR |
Ama03028 | BONUS, ISOFORM C-RELATED |
Ama03029 | CYSTEINE PROTEASE FAMILY C1-RELATED |
Ama03030 | ALPHA KINASE/ELONGATION FACTOR 2 KINASE |
Ama03032 | |
Ama03033 | ALPHA KINASE/ELONGATION FACTOR 2 KINASE |
Ama03034 | TBC1 DOMAIN FAMILY MEMBER 19 |
Ama03035 | |
Ama03037 | BONUS, ISOFORM C-RELATED |
Ama03039 | CYSTEINE PROTEASE FAMILY C1-RELATED |
Ama03040 | CYSTEINE PROTEASE FAMILY C1-RELATED |
Ama03043 | NG5 |
Ama03044 | NEUROTRANSMITTER GATED ION CHANNEL |
Ama03045 | |
Ama03046 | NEUROTRANSMITTER GATED ION CHANNEL |
Ama03047 | NEUROTRANSMITTER GATED ION CHANNEL |
Ama03051 | UNCHARACTERIZED |
Ama03053 | UNCHARACTERIZED |
Ama03056 | ANOCTAMIN |
Ama03057 | ANOCTAMIN |
Ama03059 | TELOMERE REPEAT-BINDING FACTOR 2-INTERACTING PROTEIN 1 |
Ama03060 | CYTOCHROME P450 FAMILY 1 |
Ama03061 | PROTEIN LIN-7 HOMOLOG |