The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama03198 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
Ama03199 | THAP DOMAIN PROTEIN |
Ama03200 | ATP-DEPENDENT DNA HELICASE |
Ama03202 | |
Ama03203 | |
Ama03204 | FTP DOMAIN-CONTAINING PROTEIN |
Ama03206 | FTP DOMAIN-CONTAINING PROTEIN |
Ama03207 | |
Ama03208 | FTP DOMAIN-CONTAINING PROTEIN |
Ama03209 | FTP DOMAIN-CONTAINING PROTEIN |
Ama03210 | FTP DOMAIN-CONTAINING PROTEIN |
Ama03211 | FTP DOMAIN-CONTAINING PROTEIN |
Ama03212 | SCAVENGER RECEPTOR CLASS F |
Ama03214 | CYTOKINE RECEPTOR |
Ama03215 | SCAVENGER RECEPTOR CLASS F |
Ama03216 | FTP DOMAIN-CONTAINING PROTEIN |
Ama03217 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
Ama03218 | FTP DOMAIN-CONTAINING PROTEIN |
Ama03220 | FTP DOMAIN-CONTAINING PROTEIN |
Ama03221 | FTP DOMAIN-CONTAINING PROTEIN |
Ama03222 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
Ama03225 | |
Ama03228 | SCAVENGER RECEPTOR CLASS F |
Ama03229 | FTP DOMAIN-CONTAINING PROTEIN |
Ama03230 | SCAVENGER RECEPTOR CLASS F |
Ama03231 | |
Ama03232 | |
Ama03233 | FTP DOMAIN-CONTAINING PROTEIN |
Ama03234 | |
Ama03235 | |
Ama03237 | |
Ama03238 | INHIBITOR OF APOPTOSIS |
Ama03239 | RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR |
Ama03241 | |
Ama03242 | |
Ama03243 | |
Ama03244 | |
Ama03246 | |
Ama03247 | FTP DOMAIN-CONTAINING PROTEIN |
Ama03248 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
Ama03249 | |
Ama03250 | SCAVENGER RECEPTOR CLASS F |
Ama03251 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
Ama03252 | |
Ama03253 | FTP DOMAIN-CONTAINING PROTEIN |
Ama03254 | |
Ama03255 | FTP DOMAIN-CONTAINING PROTEIN |
Ama03257 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
Ama03258 | |
Ama03259 |