The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama03260 | FTP DOMAIN-CONTAINING PROTEIN |
Ama03261 | SCAVENGER RECEPTOR CLASS F |
Ama03262 | FTP DOMAIN-CONTAINING PROTEIN |
Ama03263 | FTP DOMAIN-CONTAINING PROTEIN |
Ama03264 | FTP DOMAIN-CONTAINING PROTEIN |
Ama03265 | FTP DOMAIN-CONTAINING PROTEIN |
Ama03266 | |
Ama03267 | FTP DOMAIN-CONTAINING PROTEIN |
Ama03268 | RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR |
Ama03269 | INHIBITOR OF APOPTOSIS |
Ama03270 | SCAVENGER RECEPTOR CLASS F |
Ama03271 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Ama03272 | RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR |
Ama03273 | INHIBITOR OF APOPTOSIS |
Ama03274 | |
Ama03275 | FTP DOMAIN-CONTAINING PROTEIN |
Ama03276 | FTP DOMAIN-CONTAINING PROTEIN |
Ama03277 | SCAVENGER RECEPTOR CLASS F |
Ama03278 | |
Ama03279 | FTP DOMAIN-CONTAINING PROTEIN |
Ama03281 | FTP DOMAIN-CONTAINING PROTEIN |
Ama03282 | |
Ama03283 | SCAVENGER RECEPTOR CLASS F |
Ama03284 | FTP DOMAIN-CONTAINING PROTEIN |
Ama03285 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
Ama03286 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
Ama03287 | |
Ama03288 | FTP DOMAIN-CONTAINING PROTEIN |
Ama03289 | |
Ama03290 | FTP DOMAIN-CONTAINING PROTEIN |
Ama03291 | |
Ama03292 | |
Ama03293 | FTP DOMAIN-CONTAINING PROTEIN |
Ama03294 | |
Ama03295 | FTP DOMAIN-CONTAINING PROTEIN |
Ama03297 | FTP DOMAIN-CONTAINING PROTEIN |
Ama03298 | FTP DOMAIN-CONTAINING PROTEIN |
Ama03299 | FTP DOMAIN-CONTAINING PROTEIN |
Ama03300 | FTP DOMAIN-CONTAINING PROTEIN |
Ama03302 | |
Ama03303 | FTP DOMAIN-CONTAINING PROTEIN |
Ama03304 | SCAVENGER RECEPTOR CLASS F |
Ama03306 | |
Ama03307 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
Ama03308 | SCAVENGER RECEPTOR CLASS F |
Ama03309 | |
Ama03310 | |
Ama03311 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
Ama03312 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
Ama03313 | FTP DOMAIN-CONTAINING PROTEIN |