The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama03466 | |
Ama03473 | DYNEIN HEAVY CHAIN |
Ama03475 | JM1 PROTEIN |
Ama03476 | |
Ama03477 | TRANSPOSON |
Ama03478 | PIRNA BIOGENESIS PROTEIN EXD1 |
Ama03479 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Ama03480 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Ama03481 | PROTEIN PHOSPHATASE 2C |
Ama03482 | GH3 DOMAIN-CONTAINING PROTEIN |
Ama03483 | FUCOSE-1-PHOSPHATE GUANYLYLTRANSFERASE |
Ama03484 | |
Ama03485 | BETA-1,4-MANNOSYLTRANSFERASE EGH |
Ama03486 | |
Ama03487 | |
Ama03488 | |
Ama03489 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama03491 | LEUCINE RICH REPEAT FAMILY PROTEIN |
Ama03492 | PROTEIN FAM181B |
Ama03493 | FOLATE RECEPTOR |
Ama03494 | NADH-UBIQUINONE OXIDOREDUCTASE B8 SUBUNIT |
Ama03495 | |
Ama03498 | CAMK FAMILY PROTEIN KINASE |
Ama03500 | 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED |
Ama03501 | |
Ama03502 | |
Ama03506 | LEUCYL-TRNA SYNTHETASE |
Ama03507 | NUCLEAR MOVEMENT PROTEIN NUDC |
Ama03508 | PHD FINGER PROTEINS |
Ama03509 | MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED |
Ama03510 | |
Ama03512 | NEUROTRANSMITTER GATED ION CHANNEL |
Ama03514 | HSDA/SDA1-RELATED |
Ama03515 | UNCHARACTERIZED |
Ama03516 | |
Ama03517 | |
Ama03518 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama03519 | |
Ama03521 | |
Ama03523 | ANDROGEN INDUCED INHIBITOR OF PROLIFERATION AS3 / PDS5-RELATED |
Ama03524 | ANDROGEN INDUCED INHIBITOR OF PROLIFERATION AS3 / PDS5-RELATED |
Ama03526 | |
Ama03527 | |
Ama03528 | PR DOMAIN ZINC FINGER PROTEIN |
Ama03529 | URICASE AND TRANSTHYRETIN-RELATED |
Ama03530 | UNCHARACTERIZED |
Ama03531 | UNCHARACTERIZED |
Ama03534 | MASK PROTEIN |
Ama03538 | BONUS, ISOFORM C-RELATED |
Ama03539 | ALPHA-GALACTOSIDASE/ALPHA-N-ACETYLGALACTOSAMINIDASE |