The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama03540 | TUBULIN |
Ama03541 | GM2 GANGLIOSIDE ACTIVATOR PROTEIN |
Ama03542 | GM2 GANGLIOSIDE ACTIVATOR PROTEIN |
Ama03543 | |
Ama03544 | EPHRIN TYPE-B RECEPTOR |
Ama03546 | EPHRIN TYPE-B RECEPTOR |
Ama03547 | |
Ama03548 | MULTIPLE EPIDERMAL GROWTH FACTOR-LIKE DOMAINS PROTEIN |
Ama03549 | |
Ama03550 | EGF-LIKE DOMAIN-CONTAINING PROTEIN |
Ama03551 | |
Ama03553 | OXIDOREDUCTASE GLYR1-RELATED |
Ama03554 | |
Ama03555 | GABA-B RECEPTOR |
Ama03556 | |
Ama03557 | SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED |
Ama03559 | TRANSCRIPTASE, PUTATIVE-RELATED-RELATED |
Ama03560 | PUTATIVE-RELATED |
Ama03561 | CEREBELLIN-RELATED |
Ama03563 | CEREBELLIN-RELATED |
Ama03564 | AGAP001464-PB |
Ama03565 | |
Ama03566 | AGAP001464-PB |
Ama03567 | ANKYRIN REPEAT-CONTAINING |
Ama03568 | TRANSMEMBRANE PROTEIN HTP-1 RELATED |
Ama03569 | BONUS, ISOFORM C-RELATED |
Ama03572 | UNCHARACTERIZED |
Ama03573 | PUTATIVE-RELATED |
Ama03574 | |
Ama03575 | |
Ama03576 | CYSTEINE-RICH HYDROPHOBIC DOMAIN PROTEIN BRAIN X-LINKED PROTEIN |
Ama03577 | BONUS, ISOFORM C-RELATED |
Ama03578 | NUCLEOPORIN P54 |
Ama03579 | UBIQUITIN-PROTEIN LIGASE E3C |
Ama03580 | NUCLEAR TRANSCRIPTION FACTOR, X-BOX BINDING 1 NFX1 |
Ama03581 | CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATED |
Ama03582 | ZINC FINGER PROTEIN |
Ama03585 | METABOTROPIC GLUTAMATE RECEPTOR |
Ama03586 | MARINER MOS1 TRANSPOSASE-LIKE PROTEIN |
Ama03587 | RETINOL DEHYDROGENASE |
Ama03588 | G-PROTEIN COUPLED RECEPTOR |
Ama03589 | UDP-GLUCOSE DEHYDROGENASE/UDP-MANNAC DEHYDROGENASE |
Ama03590 | |
Ama03591 | PROPERDIN |
Ama03592 | |
Ama03593 | ATP-DEPENDENT DNA HELICASE |
Ama03594 | |
Ama03595 | TRANSPOSON |
Ama03596 | TRANSPOSON |
Ama03597 | ALPHA KINASE/ELONGATION FACTOR 2 KINASE |