The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama03739 | CEREBELLIN-RELATED |
Ama03740 | CEREBELLIN-RELATED |
Ama03741 | |
Ama03742 | PHYTANOYL-COA DIOXYGENASE DOMAIN CONTAINING 1 |
Ama03743 | |
Ama03745 | ALPHA KINASE/ELONGATION FACTOR 2 KINASE |
Ama03746 | ALPHA KINASE/ELONGATION FACTOR 2 KINASE |
Ama03749 | ALPHA KINASE/ELONGATION FACTOR 2 KINASE |
Ama03750 | TOLL-LIKE RECEPTOR |
Ama03751 | TOLL-LIKE RECEPTOR |
Ama03758 | CEREBELLIN-RELATED |
Ama03759 | NEUROTRANSMITTER GATED ION CHANNEL |
Ama03761 | NEUROTRANSMITTER GATED ION CHANNEL |
Ama03762 | CEREBELLIN-RELATED |
Ama03763 | |
Ama03764 | CEREBELLIN-RELATED |
Ama03768 | CEREBELLIN-RELATED |
Ama03769 | CEREBELLIN-RELATED |
Ama03770 | CEREBELLIN-RELATED |
Ama03771 | CEREBELLIN-RELATED |
Ama03772 | CEREBELLIN-RELATED |
Ama03773 | ALPHA KINASE/ELONGATION FACTOR 2 KINASE |
Ama03774 | ALPHA KINASE/ELONGATION FACTOR 2 KINASE |
Ama03775 | CEREBELLIN-RELATED |
Ama03776 | |
Ama03777 | CADHERIN-87A |
Ama03778 | CEREBELLIN-RELATED |
Ama03779 | |
Ama03780 | CEREBELLIN-RELATED |
Ama03781 | CEREBELLIN-RELATED |
Ama03782 | CEREBELLIN-RELATED |
Ama03783 | ALPHA KINASE/ELONGATION FACTOR 2 KINASE |
Ama03784 | CEREBELLIN-RELATED |
Ama03785 | |
Ama03786 | |
Ama03790 | |
Ama03791 | SET DOMAIN-CONTAINING PROTEIN-RELATED |
Ama03792 | |
Ama03794 | KRUEPPEL-LIKE TRANSCRIPTION FACTOR |
Ama03795 | |
Ama03796 | UBIQUITIN-CONJUGATING ENZYME E2 |
Ama03799 | |
Ama03800 | UNCHARACTERIZED |
Ama03801 | UNCHARACTERIZED |
Ama03803 | |
Ama03804 | |
Ama03807 | |
Ama03809 | |
Ama03810 | CAPZ-INTERACTING PROTEIN AND RELATED PROTEINS |
Ama03811 | UNCHARACTERIZED |