The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama04012 | |
Ama04013 | |
Ama04015 | |
Ama04016 | UNCHARACTERIZED |
Ama04017 | FTP DOMAIN-CONTAINING PROTEIN |
Ama04018 | ALPHA KINASE/ELONGATION FACTOR 2 KINASE |
Ama04019 | PUTATIVE-RELATED |
Ama04020 | SMALL UBIQUITIN-RELATED MODIFIER |
Ama04021 | |
Ama04022 | |
Ama04023 | |
Ama04024 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama04025 | |
Ama04026 | PARP/ZINC FINGER CCCH TYPE DOMAIN CONTAINING PROTEIN |
Ama04027 | ALPHA KINASE/ELONGATION FACTOR 2 KINASE |
Ama04028 | PUTATIVE-RELATED |
Ama04029 | SIMILAR TO RIKEN CDNA E130308A19 |
Ama04030 | PROTEIN CBG23764 |
Ama04031 | PROTEIN CBG23764 |
Ama04032 | PROTEIN CBG23764 |
Ama04033 | |
Ama04034 | |
Ama04035 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama04037 | ADRENERGIC RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR |
Ama04038 | ADRENERGIC RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR |
Ama04039 | ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 4 |
Ama04040 | ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 4 |
Ama04045 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama04047 | DOLICHYL GLYCOSYLTRANSFERASE |
Ama04048 | ZGC:195170 |
Ama04049 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama04050 | |
Ama04051 | SET DOMAIN-CONTAINING PROTEIN-RELATED |
Ama04058 | |
Ama04060 | POLYCYSTIC KIDNEY AND HEPATIC DISEASE 1 (AUTOSOMAL RECESSIVE)-LIKE 1 |
Ama04064 | INHIBITOR OF APOPTOSIS |
Ama04065 | |
Ama04066 | |
Ama04067 | RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR |
Ama04068 | ADIPOR/PROGESTIN RECEPTOR-RELATED |
Ama04070 | |
Ama04071 | |
Ama04073 | |
Ama04074 | ENDONUCLEASE-RELATED |
Ama04075 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Ama04076 | |
Ama04077 | |
Ama04078 | PROTEIN CBG10425 |
Ama04079 | PROTEIN CBG10425 |
Ama04080 | INTEGRASE CORE DOMAIN CONTAINING PROTEIN |