The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama04083 | G-PROTEIN COUPLED RECEPTOR |
Ama04084 | |
Ama04085 | |
Ama04091 | THAP DOMAIN PROTEIN |
Ama04092 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Ama04093 | UNCHARACTERIZED |
Ama04096 | TENEURIN AND N-ACETYLGLUCOSAMINE-1-PHOSPHODIESTER ALPHA-N-ACETYLGLUCOSAMINIDASE |
Ama04097 | TUBULIN |
Ama04098 | |
Ama04099 | |
Ama04100 | CCHC-TYPE DOMAIN-CONTAINING PROTEIN |
Ama04101 | |
Ama04104 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Ama04105 | PROTEIN CBG23764 |
Ama04106 | |
Ama04107 | 60S RIBOSOMAL PROTEIN L35 |
Ama04108 | TRANSPOSABLE ELEMENT-RELATED |
Ama04109 | ARP2/3 COMPLEX 16 KD SUBUNIT P16-ARC |
Ama04110 | GRIP AND COILED-COIL DOMAIN-CONTAINING PROTEIN 1 |
Ama04111 | |
Ama04112 | |
Ama04114 | AMINO ACID TRANSPORTER |
Ama04115 | |
Ama04116 | AP ENDONUCLEASE |
Ama04117 | |
Ama04118 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama04126 | |
Ama04128 | |
Ama04129 | |
Ama04130 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Ama04131 | |
Ama04132 | MITOCHONDRIA-EATING PROTEIN-RELATED |
Ama04134 | |
Ama04135 | |
Ama04136 | TWISTER |
Ama04137 | TENEURIN AND N-ACETYLGLUCOSAMINE-1-PHOSPHODIESTER ALPHA-N-ACETYLGLUCOSAMINIDASE |
Ama04138 | KELCH PROTEIN |
Ama04139 | |
Ama04140 | |
Ama04142 | HISTIDINE-RICH GLYCOPROTEIN |
Ama04143 | |
Ama04144 | |
Ama04145 | INTEGRASE CORE DOMAIN CONTAINING PROTEIN |
Ama04146 | PROTEIN CBG10425 |
Ama04147 | SIMILAR TO RIKEN CDNA E130308A19 |
Ama04148 | TRANSPOSON |
Ama04149 | MYOSIN HEAVY CHAIN, NON-MUSCLE |
Ama04152 | |
Ama04153 | |
Ama04154 |