The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama04217 | DIMETHYLANILINE MONOOXYGENASE |
Ama04219 | DIMETHYLANILINE MONOOXYGENASE |
Ama04222 | |
Ama04227 | DIMETHYLANILINE MONOOXYGENASE |
Ama04230 | OSJNBA0013A04.12 PROTEIN |
Ama04231 | BONUS, ISOFORM C-RELATED |
Ama04234 | DNA REPLICATION-RELATED ELEMENT FACTOR, ISOFORM A |
Ama04235 | GALACTOSE-3-O-SULFOTRANSFERASE |
Ama04236 | HOMEOBOX PROTEIN BARH-LIKE |
Ama04237 | |
Ama04238 | JAK PATHWAY SIGNAL TRANSDUCTION ADAPTOR MOLECULE |
Ama04239 | |
Ama04240 | |
Ama04241 | G PROTEIN-COUPLED RECEPTOR 157-RELATED |
Ama04242 | DNA POLYMERASE |
Ama04243 | ZINC FINGER PROTEIN |
Ama04244 | THAP DOMAIN PROTEIN |
Ama04245 | |
Ama04246 | |
Ama04247 | UNCHARACTERIZED |
Ama04248 | |
Ama04249 | DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBER |
Ama04251 | DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBER |
Ama04252 | PUTATIVE-RELATED |
Ama04254 | |
Ama04255 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Ama04256 | HISTONE PARYLATION FACTOR 1 |
Ama04258 | TOL-PAL SYSTEM PROTEIN TOLA |
Ama04260 | |
Ama04261 | |
Ama04262 | CALPONIN |
Ama04263 | |
Ama04264 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Ama04265 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama04267 | |
Ama04268 | RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR |
Ama04269 | INHIBITOR OF APOPTOSIS |
Ama04271 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama04272 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama04273 | |
Ama04274 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama04275 | INTEGRASE CORE DOMAIN CONTAINING PROTEIN |
Ama04276 | PROTEIN ZWILCH HOMOLOG |
Ama04277 | XAA-PRO AMINOPEPTIDASE 3 |
Ama04278 | AMIDOPHOSPHORIBOSYLTRANSFERASE |
Ama04279 | MULTIFUNCTIONAL PROTEIN ADE2 |
Ama04281 | P PROTEIN |
Ama04282 | P PROTEIN |
Ama04284 | - |
Ama04286 | - |