The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama04373 | PROTEASE S28 PRO-X CARBOXYPEPTIDASE-RELATED |
Ama04374 | |
Ama04375 | MICROSOMAL SIGNAL PEPTIDASE 23 KD SUBUNIT SPC22/23 |
Ama04377 | DESMOGLEIN FAMILY MEMBER |
Ama04380 | MITOCHONDRIAL ATP SYNTHASE COUPLING FACTOR B |
Ama04381 | ACETYLCHOLINESTERASE |
Ama04384 | UNNAMED PRODUCT |
Ama04385 | UNNAMED PRODUCT |
Ama04386 | - |
Ama04387 | 5'-AMP-ACTIVATED PROTEIN KINASE , BETA SUBUNIT |
Ama04388 | FTP DOMAIN-CONTAINING PROTEIN |
Ama04389 | T-SNARE COILED-COIL HOMOLOGY DOMAIN-CONTAINING PROTEIN |
Ama04390 | PROTEIN CBG22215 |
Ama04391 | SOLUTE CARRIER FAMILY 5 |
Ama04392 | NXPE FAMILY MEMBER |
Ama04393 | SOLUTE CARRIER FAMILY 5 |
Ama04394 | NXPE FAMILY MEMBER |
Ama04395 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Ama04396 | PEPTIDASE |
Ama04397 | |
Ama04398 | |
Ama04399 | |
Ama04400 | IP13529P |
Ama04401 | |
Ama04402 | SOLUTE CARRIER FAMILY 5 |
Ama04403 | SOLUTE CARRIER FAMILY 5 |
Ama04404 | |
Ama04405 | EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN |
Ama04406 | THAP DOMAIN PROTEIN |
Ama04407 | MULTI-COPPER OXIDASE |
Ama04408 | |
Ama04410 | |
Ama04411 | ATP-DEPENDENT DNA HELICASE |
Ama04412 | MULTI-COPPER OXIDASE |
Ama04413 | |
Ama04414 | |
Ama04415 | |
Ama04416 | FTP DOMAIN-CONTAINING PROTEIN |
Ama04417 | SCAVENGER RECEPTOR CLASS F |
Ama04418 | PROTEIN CBG22215 |
Ama04419 | |
Ama04421 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
Ama04424 | |
Ama04425 | |
Ama04426 | FTP DOMAIN-CONTAINING PROTEIN |
Ama04427 | PROTEIN CBG22215 |
Ama04428 | |
Ama04430 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
Ama04431 | |
Ama04432 |