The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama04493 | |
Ama04496 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
Ama04497 | |
Ama04501 | INTEGRASE CORE DOMAIN CONTAINING PROTEIN |
Ama04502 | INTEGRASE CORE DOMAIN CONTAINING PROTEIN |
Ama04503 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
Ama04504 | |
Ama04505 | ENDONUCLEASE-RELATED |
Ama04506 | |
Ama04507 | |
Ama04510 | LEUCINE ZIPPER PROTEIN 4-RELATED |
Ama04513 | |
Ama04514 | INTEGRASE CORE DOMAIN CONTAINING PROTEIN |
Ama04516 | INTEGRASE CORE DOMAIN CONTAINING PROTEIN |
Ama04517 | - |
Ama04519 | |
Ama04520 | |
Ama04521 | |
Ama04523 | BONUS, ISOFORM C-RELATED |
Ama04529 | |
Ama04530 | BONUS, ISOFORM C-RELATED |
Ama04531 | ACTIN FILAMENT-ASSOCIATED PROTEIN 1 FAMILY MEMBER |
Ama04532 | |
Ama04533 | |
Ama04535 | BONUS, ISOFORM C-RELATED |
Ama04537 | PROTEIN CBG22215 |
Ama04541 | |
Ama04542 | SCAVENGER RECEPTOR CLASS F |
Ama04543 | |
Ama04544 | |
Ama04545 | PROTEIN CBG22215 |
Ama04546 | EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN |
Ama04547 | |
Ama04548 | PROTEIN CBG22215 |
Ama04554 | |
Ama04555 | |
Ama04556 | |
Ama04557 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
Ama04558 | |
Ama04560 | |
Ama04561 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
Ama04564 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
Ama04565 | LORICRIN |
Ama04566 | SCAVENGER RECEPTOR CLASS F |
Ama04568 | LORICRIN |
Ama04569 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
Ama04570 | FTP DOMAIN-CONTAINING PROTEIN |
Ama04573 | |
Ama04574 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
Ama04577 |