The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama04716 | |
Ama04717 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Ama04718 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Ama04719 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Ama04720 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Ama04721 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Ama04722 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Ama04723 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Ama04724 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Ama04725 | UNNAMED PRODUCT |
Ama04726 | UNNAMED PRODUCT |
Ama04727 | |
Ama04728 | BETA-GALACTOSIDASE RELATED |
Ama04729 | UNNAMED PRODUCT |
Ama04730 | UNNAMED PRODUCT |
Ama04731 | UNNAMED PRODUCT |
Ama04732 | |
Ama04734 | BETA-GALACTOSIDASE RELATED |
Ama04735 | BETA-GALACTOSIDASE RELATED |
Ama04736 | |
Ama04737 | UNNAMED PRODUCT |
Ama04738 | BETA-GALACTOSIDASE RELATED |
Ama04739 | DAP3-BINDING CELL DEATH ENHANCER 1 |
Ama04740 | THYROID HORMONE RECEPTOR-ASSOCIATED PROTEIN-RELATED |
Ama04744 | PLATELET-DERIVED GROWTH FACTOR |
Ama04745 | |
Ama04747 | NEUROTRANSMITTER GATED ION CHANNEL |
Ama04748 | CYCLINS |
Ama04749 | CYCLINS |
Ama04751 | NUCLEOPORIN |
Ama04752 | |
Ama04753 | |
Ama04754 | |
Ama04755 | UNCHARACTERIZED |
Ama04756 | |
Ama04757 | EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN |
Ama04759 | |
Ama04760 | TESTICULAR SOLUBLE ADENYLYL CYCLASE |
Ama04761 | |
Ama04762 | |
Ama04764 | TESTICULAR SOLUBLE ADENYLYL CYCLASE |
Ama04765 | |
Ama04766 | |
Ama04767 | |
Ama04769 | |
Ama04770 | RING FINGER PROTEIN 219 |
Ama04771 | SOLUTE CARRIER FAMILY 10 MEMBER 7 |
Ama04773 | RNA RECOGNITION RRM/RNP DOMAIN |
Ama04775 | AAA-FAMILY ATPASE |
Ama04776 | NEUROTRANSMITTER GATED ION CHANNEL |