The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama04901 | PHOSPHOMANNOMUTASE 45A |
Ama04903 | SH3 DOMAIN-CONTAINING |
Ama04904 | AMINO ACID TRANSPORTER |
Ama04905 | CARBOHYDRATE SULFOTRANSFERASE 15 |
Ama04907 | CARBOHYDRATE SULFOTRANSFERASE 15 |
Ama04908 | CARBOHYDRATE SULFOTRANSFERASE 15 |
Ama04909 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Ama04910 | GLYCOPROTEIN HORMONE RECEPTOR |
Ama04911 | |
Ama04912 | E3 UBIQUITIN-PROTEIN LIGASE TRIM |
Ama04914 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama04916 | HELIX LOOP HELIX PROTEIN 21-RELATED |
Ama04920 | |
Ama04921 | |
Ama04923 | SI:CH211-108C17.2-RELATED-RELATED |
Ama04924 | ZGC:195170 |
Ama04925 | POU DOMAIN |
Ama04926 | MOTILE SPERM DOMAIN-CONTAINING PROTEIN 2 |
Ama04927 | TRNA-AMINOACYLATION COFACTOR ARC1 FAMILY MEMBER |
Ama04928 | |
Ama04929 | SOLUTE CARRIER FAMILY 35 |
Ama04930 | |
Ama04931 | SH3 ADAPTER PROTEIN SPIN90 NCK INTERACTING PROTEIN WITH SH3 DOMAIN |
Ama04933 | THAP DOMAIN PROTEIN |
Ama04934 | |
Ama04936 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama04937 | |
Ama04938 | IONOTROPIC GLUTAMATE RECEPTOR |
Ama04939 | GALACTOSIDE 2-L-FUCOSYLTRANSFERASE |
Ama04940 | MATRIX PROTEIN, PUTATIVE-RELATED |
Ama04942 | MATRIX PROTEIN, PUTATIVE-RELATED |
Ama04943 | MATRIX PROTEIN, PUTATIVE-RELATED |
Ama04944 | |
Ama04945 | ARSENITE INDUCUBLE RNA ASSOCIATED PROTEIN AIP-1-RELATED |
Ama04946 | |
Ama04947 | ALPHA KINASE/ELONGATION FACTOR 2 KINASE |
Ama04948 | ALPHA KINASE/ELONGATION FACTOR 2 KINASE |
Ama04949 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Ama04950 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Ama04951 | |
Ama04952 | |
Ama04954 | |
Ama04955 | |
Ama04956 | G-PROTEIN COUPLED RECEPTOR |
Ama04957 | G-PROTEIN COUPLED RECEPTOR |
Ama04958 | |
Ama04959 | G-PROTEIN COUPLED RECEPTOR |
Ama04960 | INNER MEMBRANE TRANSPORT PROTEIN YAJR |
Ama04961 | SARCOGLYCAN |
Ama04962 | HL07962P-RELATED |