The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama05101 | THIOREDOXIN DOMAIN-CONTAINING PROTEIN 9 |
Ama05102 | SERINE/THREONINE-PROTEIN KINASE PIM |
Ama05103 | RHO-TYPE GTPASE ACTIVATING PROTEIN |
Ama05105 | SARCOGLYCANS |
Ama05106 | |
Ama05109 | |
Ama05110 | |
Ama05111 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama05112 | |
Ama05113 | ALPHA KINASE/ELONGATION FACTOR 2 KINASE |
Ama05115 | ALPHA KINASE/ELONGATION FACTOR 2 KINASE |
Ama05116 | |
Ama05117 | |
Ama05118 | ALPHA KINASE/ELONGATION FACTOR 2 KINASE |
Ama05119 | |
Ama05120 | |
Ama05121 | ALPHA KINASE/ELONGATION FACTOR 2 KINASE |
Ama05122 | UNCHARACTERIZED |
Ama05123 | |
Ama05124 | ALPHA KINASE/ELONGATION FACTOR 2 KINASE |
Ama05125 | - |
Ama05126 | ALPHA KINASE/ELONGATION FACTOR 2 KINASE |
Ama05127 | TRANSCRIPTASE, PUTATIVE-RELATED-RELATED |
Ama05128 | ALPHA KINASE/ELONGATION FACTOR 2 KINASE |
Ama05130 | ALPHA KINASE/ELONGATION FACTOR 2 KINASE |
Ama05131 | RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR |
Ama05132 | INHIBITOR OF APOPTOSIS |
Ama05134 | ALPHA KINASE/ELONGATION FACTOR 2 KINASE |
Ama05135 | TRANSCRIPTASE, PUTATIVE-RELATED-RELATED |
Ama05136 | ALPHA KINASE/ELONGATION FACTOR 2 KINASE |
Ama05138 | |
Ama05139 | ALPHA KINASE/ELONGATION FACTOR 2 KINASE |
Ama05140 | E3 UBIQUITIN-PROTEIN LIGASE NHLRC1-RELATED |
Ama05141 | |
Ama05143 | HISTIDYL-TRNA SYNTHETASE |
Ama05144 | PROTON CHANNEL OTOP |
Ama05150 | PROTON CHANNEL OTOP |
Ama05151 | DNA-DIRECTED RNA POLYMERASE I SUBUNIT RPA49 |
Ama05152 | |
Ama05153 | PERIOSTIN-RELATED |
Ama05154 | |
Ama05155 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
Ama05156 | |
Ama05157 | PARANEOPLASTIC ANTIGEN |
Ama05158 | BTB AND MATH DOMAIN-CONTAINING PROTEIN 36-RELATED |
Ama05159 | |
Ama05161 | INHIBITOR OF APOPTOSIS |
Ama05162 | PERIOSTIN-RELATED |
Ama05163 | BTB AND MATH DOMAIN-CONTAINING PROTEIN 36-RELATED |
Ama05164 | PERIOSTIN-RELATED |