The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama05224 | |
Ama05225 | |
Ama05226 | IONOTROPIC GLUTAMATE RECEPTOR |
Ama05227 | SERINE/THREONINE-PROTEIN KINASE PIM |
Ama05231 | MULTI-COPPER OXIDASE |
Ama05233 | ALPHA-GALACTOSIDASE/ALPHA-N-ACETYLGALACTOSAMINIDASE |
Ama05234 | UNCHARACTERIZED |
Ama05235 | PUTATIVE-RELATED |
Ama05236 | PARANEOPLASTIC ANTIGEN |
Ama05238 | METHYLTRANSFERASE-LIKE PROTEIN 24 |
Ama05239 | PUTATIVE-RELATED |
Ama05240 | PUTATIVE-RELATED |
Ama05241 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama05242 | GALECTIN |
Ama05244 | GALECTIN |
Ama05245 | |
Ama05246 | GUANYLYL CYCLASE |
Ama05247 | |
Ama05248 | UNCHARACTERIZED |
Ama05253 | |
Ama05254 | PUTATIVE-RELATED |
Ama05255 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Ama05256 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama05257 | CYCLIC NUCLEOTIDE-GATED CATION CHANNEL SUBUNIT A |
Ama05258 | DNA2/NAM7 HELICASE FAMILY MEMBER |
Ama05259 | CCHC-TYPE DOMAIN-CONTAINING PROTEIN |
Ama05260 | REVERSE TRANSCRIPTASES |
Ama05261 | |
Ama05262 | ZINC FINGER PROTEIN WITH KRAB AND SCAN DOMAINS |
Ama05263 | PROTEIN CBG16428 |
Ama05264 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Ama05265 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Ama05266 | ZINC FINGER PROTEIN WITH KRAB AND SCAN DOMAINS |
Ama05267 | STEROL REGULATORY ELEMENT-BINDING PROTEIN |
Ama05268 | SEQUESTOSOME 1-RELATED |
Ama05269 | SEQUESTOSOME 1-RELATED |
Ama05270 | TETRATRICOPEPTIDE REPEAT PROTEIN 29 |
Ama05271 | STAGA COMPLEX 65 SUBUNIT GAMMA |
Ama05272 | - |
Ama05273 | NFRKB-RELATED |
Ama05274 | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F-RELATED |
Ama05275 | ATILLA, ISOFORM B-RELATED-RELATED |
Ama05276 | PROLYL 4-HYDROXYLASE ALPHA SUBUNIT |
Ama05277 | BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE |
Ama05278 | HIGH MOBILITY GROUP PROTEIN DSP1 |
Ama05279 | SAP30 |
Ama05280 | BARDET-BIEDL SYNDROME 7 PROTEIN |
Ama05282 | PROTEIN ZERKNUELLT 1-RELATED |
Ama05283 | |
Ama05284 | GS HOMEOBOX 2 |