The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama04840 | CARBONIC ANHYDRASE |
Ama04841 | CS DOMAIN-CONTAINING PROTEIN |
Ama04842 | MUCIN-17 |
Ama04843 | PEPTIDASE |
Ama04845 | FUKUTIN RELATED PROTEIN |
Ama04846 | PEPTIDASE |
Ama04847 | DACHSHUND |
Ama04852 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Ama04854 | |
Ama04855 | CHROMOSOME 8 OPEN READING FRAME 48 |
Ama04857 | ARMADILLO REPEAT-CONTAINING PROTEIN 3 |
Ama04858 | ANKYRIN REPEAT FAMILY PROTEIN |
Ama04859 | PUTATIVE-RELATED |
Ama04860 | |
Ama04861 | |
Ama04862 | |
Ama04863 | |
Ama04864 | |
Ama04865 | THREE PRIME REPAIR EXONUCLEASE 1, 2 |
Ama04866 | |
Ama04867 | DNA DAMAGE-INDUCIBLE APOPTOSIS SUPPRESSOR PROTEIN DDIAS |
Ama04868 | RAS-RELATED PROTEIN RAB |
Ama04869 | ARYL HYDROCARBON RECEPTOR INTERACTING PROTEIN RELATED |
Ama04870 | |
Ama04872 | GLUTAREDOXIN DOMAIN-CONTAINING CYSTEINE-RICH PROTEIN 1 |
Ama04873 | |
Ama04874 | UPF0462 PROTEIN |
Ama04875 | |
Ama04876 | SODIUM/CHLORIDE DEPENDENT TRANSPORTER |
Ama04878 | |
Ama04879 | |
Ama04880 | PULMONARY SURFACTANT-ASSOCIATED PROTEIN A |
Ama04881 | PULMONARY SURFACTANT-ASSOCIATED PROTEIN A |
Ama04882 | PULMONARY SURFACTANT-ASSOCIATED PROTEIN A |
Ama04883 | PULMONARY SURFACTANT-ASSOCIATED PROTEIN A |
Ama04884 | PULMONARY SURFACTANT-ASSOCIATED PROTEIN A |
Ama04885 | |
Ama04886 | PULMONARY SURFACTANT-ASSOCIATED PROTEIN A |
Ama04888 | PULMONARY SURFACTANT-ASSOCIATED PROTEIN A |
Ama04889 | SULFATE TRANSPORTER |
Ama04890 | SULFATE TRANSPORTER |
Ama04891 | SULFATE TRANSPORTER |
Ama04892 | |
Ama04893 | CHLOROPLAST 50S RIBOSOMAL PROTEIN L22-RELATED |
Ama04894 | L-ASPARAGINASE |
Ama04895 | IONOTROPIC GLUTAMATE RECEPTOR |
Ama04896 | |
Ama04898 | |
Ama04899 | |
Ama04900 | NF-KAPPA-B INHIBITOR ALPHA |