The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama05165 | |
Ama05166 | MEPRIN/TRAF-LIKE MATH FAMILY-C.ELEGANS |
Ama05167 | RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR |
Ama05168 | INHIBITOR OF APOPTOSIS |
Ama05169 | BTB AND MATH DOMAIN-CONTAINING PROTEIN 36-RELATED |
Ama05170 | |
Ama05171 | |
Ama05172 | NEPHRIN |
Ama05173 | NEPHRIN |
Ama05174 | NEPHRIN |
Ama05175 | INTEGRASE CORE DOMAIN CONTAINING PROTEIN |
Ama05176 | INHIBITOR OF APOPTOSIS |
Ama05177 | |
Ama05178 | CARCINOEMBRYONIC ANTIGEN-RELATED CELL ADHESION MOLECULE 8 |
Ama05179 | IG-LIKE DOMAIN-CONTAINING PROTEIN |
Ama05180 | |
Ama05181 | TRANSCRIPTIONAL REPRESSOR PROTEIN YY |
Ama05182 | DNA POLYMERASE |
Ama05183 | |
Ama05184 | PROTEIN INTURNED |
Ama05185 | APOPTOSIS-INDUCING FACTOR 1 |
Ama05186 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama05187 | METALLOPROTEASE INHIBITOR |
Ama05188 | |
Ama05189 | |
Ama05190 | INHIBITOR OF APOPTOSIS |
Ama05191 | |
Ama05194 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
Ama05195 | |
Ama05196 | INTEGRASE CORE DOMAIN CONTAINING PROTEIN |
Ama05197 | |
Ama05198 | PROTEIN CBG10425 |
Ama05199 | PROTEIN CBG10425 |
Ama05200 | |
Ama05201 | FTP DOMAIN-CONTAINING PROTEIN |
Ama05202 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
Ama05203 | ATP-BINDING TRANSPORT PROTEIN-RELATED |
Ama05204 | |
Ama05205 | PUTATIVE-RELATED |
Ama05206 | FIBRONECTIN TYPE-III DOMAIN-CONTAINING PROTEIN-RELATED |
Ama05208 | |
Ama05209 | CARBONIC ANHYDRASE |
Ama05210 | GABA-B RECEPTOR |
Ama05211 | GABA-B RECEPTOR |
Ama05212 | ALPHA KINASE/ELONGATION FACTOR 2 KINASE |
Ama05214 | |
Ama05215 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama05216 | |
Ama05219 | ALPHA KINASE/ELONGATION FACTOR 2 KINASE |
Ama05222 |