The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama05353 | IONOTROPIC GLUTAMATE RECEPTOR |
Ama05355 | GLUCOSE-METHANOL-CHOLINE GMC OXIDOREDUCTASE |
Ama05356 | GLUCOSE-METHANOL-CHOLINE GMC OXIDOREDUCTASE |
Ama05357 | |
Ama05358 | GLUCOSE-METHANOL-CHOLINE GMC OXIDOREDUCTASE |
Ama05359 | GLUCOSE-METHANOL-CHOLINE GMC OXIDOREDUCTASE |
Ama05360 | GLUCOSE-METHANOL-CHOLINE GMC OXIDOREDUCTASE |
Ama05361 | GLUCOSE-METHANOL-CHOLINE GMC OXIDOREDUCTASE |
Ama05362 | GLUCOSE-METHANOL-CHOLINE GMC OXIDOREDUCTASE |
Ama05363 | GLUCOSE-METHANOL-CHOLINE GMC OXIDOREDUCTASE |
Ama05364 | GLUCOSE-METHANOL-CHOLINE GMC OXIDOREDUCTASE |
Ama05365 | GLUCOSE-METHANOL-CHOLINE GMC OXIDOREDUCTASE |
Ama05366 | GLUCOSE-METHANOL-CHOLINE GMC OXIDOREDUCTASE |
Ama05367 | GLUCOSE-METHANOL-CHOLINE GMC OXIDOREDUCTASE |
Ama05368 | REVERSE TRANSCRIPTASES |
Ama05369 | GLUCOSE-METHANOL-CHOLINE GMC OXIDOREDUCTASE |
Ama05370 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama05371 | |
Ama05373 | LOW-DENSITY LIPOPROTEIN RECEPTOR CLASS A DOMAIN-CONTAINING PROTEIN 2 |
Ama05374 | SULFURTRANSFERASE-RELATED |
Ama05375 | UNCHARACTERIZED |
Ama05376 | SERINE-THREONINE PROTEIN KINASE |
Ama05377 | N-ACETYLGALACTOSAMINYLTRANSFERASE |
Ama05378 | BASIC HELIX-LOOP-HELIX ZIP TRANSCRIPTION FACTOR |
Ama05380 | METHYLTRANSFERASE TYPE 11 |
Ama05381 | SMAD |
Ama05382 | UNCHARACTERIZED |
Ama05383 | VACUOLAR PROTEIN-SORTING-ASSOCIATED PROTEIN 36 |
Ama05384 | SLL0310 PROTEIN |
Ama05385 | SLL0310 PROTEIN |
Ama05386 | SLL0310 PROTEIN |
Ama05387 | |
Ama05388 | METHYLTRANSFERASE TYPE 11 |
Ama05389 | METHYLTRANSFERASE TYPE 11 |
Ama05390 | IP01015P-RELATED |
Ama05391 | |
Ama05392 | |
Ama05393 | UNCHARACTERIZED |
Ama05394 | NIEMANN PICK TYPE C2 PROTEIN NPC2-RELATED |
Ama05395 | |
Ama05396 | ENOLASE |
Ama05397 | SODIUM/CHLORIDE DEPENDENT TRANSPORTER |
Ama05398 | SODIUM/CHLORIDE DEPENDENT TRANSPORTER |
Ama05399 | SODIUM/CHLORIDE DEPENDENT TRANSPORTER |
Ama05400 | PUTATIVE-RELATED |
Ama05402 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama05403 | |
Ama05404 | |
Ama05405 | PUTATIVE-RELATED |
Ama05406 | CCHC-TYPE DOMAIN-CONTAINING PROTEIN |