The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama05525 | FI01459P |
Ama05526 | |
Ama05528 | NUCLEOPORIN P58/P45 NUCLEOPORIN-LIKE PROTEIN 1 |
Ama05529 | ALPHA KINASE/ELONGATION FACTOR 2 KINASE |
Ama05530 | ALPHA KINASE/ELONGATION FACTOR 2 KINASE |
Ama05531 | |
Ama05532 | |
Ama05533 | NUCLEOPORIN P58/P45 NUCLEOPORIN-LIKE PROTEIN 1 |
Ama05534 | DTDP-4-DEHYDRORHAMNOSE REDUCTASE |
Ama05535 | SI:DKEY-19B23.12-RELATED |
Ama05536 | |
Ama05537 | DTDP-4-DEHYDRORHAMNOSE REDUCTASE |
Ama05538 | SI:DKEY-19B23.12-RELATED |
Ama05539 | TNFR-CYS DOMAIN-CONTAINING PROTEIN |
Ama05540 | THAP DOMAIN PROTEIN |
Ama05541 | THAP DOMAIN PROTEIN |
Ama05544 | ALPHA KINASE/ELONGATION FACTOR 2 KINASE |
Ama05545 | ALPHA KINASE/ELONGATION FACTOR 2 KINASE |
Ama05546 | ALPHA KINASE/ELONGATION FACTOR 2 KINASE |
Ama05547 | ALPHA KINASE/ELONGATION FACTOR 2 KINASE |
Ama05548 | ALPHA KINASE/ELONGATION FACTOR 2 KINASE |
Ama05549 | ALPHA KINASE/ELONGATION FACTOR 2 KINASE |
Ama05550 | ALPHA KINASE/ELONGATION FACTOR 2 KINASE |
Ama05551 | MYOTUBULARIN-RELATED |
Ama05554 | |
Ama05555 | TRANSMEMBRANE PROTEIN |
Ama05560 | NEUROTRANSMITTER GATED ION CHANNEL |
Ama05561 | TRANS-SULFURATION ENZYME FAMILY MEMBER |
Ama05562 | GLYCOSYLTRANSFERASE 14 FAMILY MEMBER |
Ama05563 | CARBOHYDRATE SULFOTRANSFERASE |
Ama05564 | ENDONUCLEASE-RELATED |
Ama05565 | TYROSINE PHOSPHATSE N18, PUTATIVE-RELATED |
Ama05566 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
Ama05567 | |
Ama05568 | |
Ama05569 | |
Ama05570 | |
Ama05571 | REVERSE TRANSCRIPTASES |
Ama05572 | |
Ama05574 | FTP DOMAIN-CONTAINING PROTEIN |
Ama05575 | PROTEIN CBG22215 |
Ama05576 | REVERSE TRANSCRIPTASES |
Ama05577 | INTEGRASE CORE DOMAIN CONTAINING PROTEIN |
Ama05578 | MITOCHONDRIA-EATING PROTEIN-RELATED |
Ama05579 | NEUROTRANSMITTER GATED ION CHANNEL |
Ama05581 | |
Ama05583 | MACROGLOBULIN / COMPLEMENT |
Ama05585 | |
Ama05586 | NEUROTRANSMITTER GATED ION CHANNEL |
Ama05587 | CADHERIN-23 |