The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama05466 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama05467 | ATP-BINDING CASSETTE SUB-FAMILY C |
Ama05468 | ATP-BINDING CASSETTE SUB-FAMILY C |
Ama05469 | TRANSPOSON |
Ama05470 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama05471 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama05472 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama05473 | TRANSPOSON |
Ama05474 | PLACENTAL PROTEIN 6 |
Ama05477 | |
Ama05478 | MITOCHONDRIA-EATING PROTEIN-RELATED |
Ama05480 | |
Ama05481 | MITOCHONDRIA-EATING PROTEIN-RELATED |
Ama05482 | |
Ama05483 | |
Ama05484 | MITOCHONDRIA-EATING PROTEIN-RELATED |
Ama05485 | |
Ama05486 | |
Ama05487 | MITOCHONDRIA-EATING PROTEIN-RELATED |
Ama05488 | |
Ama05489 | |
Ama05491 | MITOCHONDRIA-EATING PROTEIN-RELATED |
Ama05492 | |
Ama05493 | |
Ama05494 | MITOCHONDRIA-EATING PROTEIN-RELATED |
Ama05495 | |
Ama05497 | METHYLTRANSFERASE |
Ama05498 | INTEGRASE CORE DOMAIN CONTAINING PROTEIN |
Ama05499 | |
Ama05500 | |
Ama05501 | REVERSE TRANSCRIPTASES |
Ama05502 | |
Ama05503 | |
Ama05504 | CCHC-TYPE DOMAIN-CONTAINING PROTEIN |
Ama05505 | OSMOTIC AVOIDANCE ABNORMAL PROTEIN 1/WD REPEAT MEMBRANE PROTEIN |
Ama05506 | PHYTANOYL-COA DIOXYGENASE DOMAIN CONTAINING 1 |
Ama05507 | PHYTANOYL-COA DIOXYGENASE DOMAIN CONTAINING 1 |
Ama05508 | |
Ama05509 | ETS |
Ama05511 | CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED |
Ama05512 | SERINE/THREONINE-PROTEIN KINASE PLK |
Ama05513 | TRANSMEMBRANE PROTEIN KIAA1109 |
Ama05515 | TRANSMEMBRANE PROTEIN KIAA1109 |
Ama05516 | TRANSMEMBRANE PROTEIN KIAA1109 |
Ama05518 | TOLL-LIKE RECEPTOR |
Ama05519 | |
Ama05520 | TRANSMEMBRANE PROTEIN KIAA1109 |
Ama05522 | |
Ama05523 | |
Ama05524 | ZINC FINGER MATRIN-TYPE PROTEIN 2 |