The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama05285 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama05286 | |
Ama05287 | |
Ama05288 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama05289 | |
Ama05291 | CEREBELLIN-RELATED |
Ama05292 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama05293 | |
Ama05294 | EMILIN ELASTIN MICROFIBRIL INTERFACE-LOCATED PROTEIN ELASTIN MICROFIBRIL INTERFACER |
Ama05295 | SET DOMAIN-CONTAINING PROTEIN-RELATED |
Ama05296 | SET DOMAIN-CONTAINING PROTEIN-RELATED |
Ama05297 | |
Ama05298 | N-LYSINE METHYLTRANSFERASE KMT5A |
Ama05302 | APICAL PROTEIN/SHROOM-RELATED |
Ama05303 | ALPHA KINASE/ELONGATION FACTOR 2 KINASE |
Ama05304 | UNCHARACTERIZED |
Ama05305 | ALPHA KINASE/ELONGATION FACTOR 2 KINASE |
Ama05306 | UNCHARACTERIZED |
Ama05307 | SERINE/THREONINE-PROTEIN KINASE PIM |
Ama05309 | COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING |
Ama05310 | COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING |
Ama05311 | COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING |
Ama05312 | COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING |
Ama05314 | |
Ama05316 | |
Ama05317 | |
Ama05318 | |
Ama05319 | PROTEIN CBR-CLEC-78 |
Ama05320 | |
Ama05321 | |
Ama05322 | |
Ama05323 | CADHERIN-87A |
Ama05325 | |
Ama05326 | |
Ama05327 | EMILIN ELASTIN MICROFIBRIL INTERFACE-LOCATED PROTEIN ELASTIN MICROFIBRIL INTERFACER |
Ama05329 | CEREBELLIN-RELATED |
Ama05330 | CEREBELLIN-RELATED |
Ama05333 | |
Ama05335 | |
Ama05337 | ALPHA KINASE/ELONGATION FACTOR 2 KINASE |
Ama05338 | APICAL PROTEIN/SHROOM-RELATED |
Ama05340 | GOLGI MEMBRANE PROTEIN YIP1 |
Ama05344 | |
Ama05345 | |
Ama05346 | |
Ama05347 | |
Ama05349 | CARBOXYLESTERASE |
Ama05350 | |
Ama05351 | |
Ama05352 |