About Archivesica marissinica

The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Archivesica marissinicaMolluscaDeep-Sea ClamHydrothermal vent1,361Haima cold seep in the South China Sea2291877

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM1484369v11.5GbChromosome2020JABXNX01Hong Kong Baptist UniversityPRJNA62989893.50%28,949

References
TitleJournalPubmed ID
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic ClamMolecular Biology and Evolution32956455

Gene Information

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Gene IDDescription
Ama03314PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Ama03315RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE
Ama03317ALPHA-(1,3)-FUCOSYLTRANSFERASE C-RELATED
Ama03318
Ama03319
Ama03322
Ama03323THAP DOMAIN PROTEIN
Ama03324
Ama03325ALPHA-(1,3)-FUCOSYLTRANSFERASE C-RELATED
Ama03327
Ama03328ALPHA-(1,3)-FUCOSYLTRANSFERASE C-RELATED
Ama03329ALPHA-(1,3)-FUCOSYLTRANSFERASE C-RELATED
Ama03330ALPHA-(1,3)-FUCOSYLTRANSFERASE C-RELATED
Ama03331MUCIN 4-RELATED
Ama03332
Ama03333LEUCOKININ RECEPTOR-RELATED
Ama03334
Ama03337
Ama03338DNA-DIRECTED RNA POLYMERASE I,II,III
Ama03339SNARE PROTEINS
Ama03340
Ama03341ANTIBIOTIC RESISTANCE PROTEIN MCBG
Ama03343WD REPEAT-CONTAINING PROTEIN 17
Ama03344FOLATE RECEPTOR
Ama03346GEM-ASSOCIATED PROTEIN 8
Ama03347ALPHA KINASE/ELONGATION FACTOR 2 KINASE
Ama03348CALCIUM BINDING PROTEIN
Ama03349CEROID-LIPOFUSCINOSIS, NEURONAL 5
Ama03350COMM DOMAIN-CONTAINING PROTEIN 4-8 FAMILY MEMBER
Ama03351ARMADILLO REPEAT-CONTAINING PROTEIN 7
Ama03353CADHERIN-87A
Ama03356RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
Ama03358SODIUM/CHLORIDE DEPENDENT TRANSPORTER
Ama03359WD40 REPEAT PROTEIN
Ama03360V-TYPE PROTON ATPASE PROTEOLIPID SUBUNIT
Ama03362HEAT SHOCK PROTEIN 90 FAMILY MEMBER
Ama03363RHO-TYPE GUANINE NUCLEOTIDE EXCHANGE FACTOR, ISOFORM F
Ama03366ALPHA KINASE/ELONGATION FACTOR 2 KINASE
Ama03368MITOCHONDRIA-EATING PROTEIN-RELATED
Ama03369FMRFAMIDE RECEPTOR-RELATED
Ama03371EF-HAND CALCIUM-BINDING DOMAIN-CONTAINING PROTEIN 12
Ama03372LEUCINE RICH REPEAT FAMILY PROTEIN
Ama0337452 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED
Ama03375RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE
Ama03377ADENYLATE CYCLASE TYPE 1
Ama03378
Ama03380JNK/SAPK-ASSOCIATED PROTEIN
Ama03388-
Ama03389ZINC FINGER PROTEIN
Ama03390
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